Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC091905.1-201ENST00000624400 311 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 CASC19-212ENST00000641153 1287 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 MIR193BHG-214ENST00000641765 509 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC102941.1-201ENST00000567616 1537 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 NF1P8-201ENST00000415351 1461 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 SMG1P1-202ENST00000309865 4223 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 OR11H5P-202ENST00000641612 1325 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 Y_RNA.356-201ENST00000365475 113 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 RNU6-225P-201ENST00000384613 103 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 RN7SKP207-201ENST00000411204 303 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC019181.1-201ENST00000417151 310 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC234781.4-201ENST00000419384 244 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 ISCA1P6-201ENST00000427740 390 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 RPS27AP6-201ENST00000427962 448 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 RPL23AP16-201ENST00000441715 421 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC132479.1-201ENST00000449160 144 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 RN7SL587P-201ENST00000459853 281 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC079193.1-201ENST00000460497 588 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 RN7SL563P-201ENST00000481233 298 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC008799.1-201ENST00000495909 457 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AL031864.2-201ENST00000498507 350 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC233724.1-201ENST00000503894 233 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 FGF7P4-201ENST00000509595 295 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 IMPA1P1-201ENST00000510718 842 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 HSPA8P13-201ENST00000523715 472 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC090502.2-201ENST00000549267 280 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC125611.2-201ENST00000551907 647 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC093063.1-201ENST00000599317 363 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AL035413.2-201ENST00000604801 525 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AL109933.4-201ENST00000612111 157 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC123788.2-201ENST00000612290 283 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 RN7SL820P-201ENST00000616437 299 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC073862.4-201ENST00000622982 854 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC139792.3-201ENST00000623525 224 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC112487.2-201ENST00000637950 304 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AC105749.1-201ENST00000631338 2008 ntBASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
DEPDC4Q8N2C3 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL157700.1-201ENST00000561973 1432 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC083806.2-201ENST00000617795 2685 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms