Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC092570.2-201ENST00000452117 1143 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 PTMAP1-205ENST00000455552 325 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 RPS3AP49-201ENST00000472161 790 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC015820.1-201ENST00000473882 321 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AP001803.1-201ENST00000525668 147 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 OR4A45P-201ENST00000529954 901 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 OR6M3P-201ENST00000531567 700 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AL596327.1-201ENST00000603629 213 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 SNX29P2-204ENST00000603801 875 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC010680.3-201ENST00000604215 520 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC078909.2-201ENST00000620584 398 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 MIR6806-201ENST00000622141 64 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 uc_338.21-201ENST00000622458 147 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC015871.5-202ENST00000623252 701 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC114546.4-201ENST00000624413 369 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC073593.1-201ENST00000624500 411 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 MIR1910-201ENST00000636955 80 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 OR7E161P-202ENST00000641994 1033 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 AC123769.2-201ENST00000624332 5984 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.64□□□□□ -1.19
RNF135Q8IUD6 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF135Q8IUD6 CCT8P1-201ENST00000413611 1657 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC107982.1-201ENST00000507171 1300 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 Y_RNA.402-201ENST00000383972 102 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 RNU6-532P-201ENST00000384318 107 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 MIR498-201ENST00000385134 124 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 MT-TD-201ENST00000387419 68 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 RPL23AP29-201ENST00000397284 453 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 PRELID1P2-201ENST00000407805 396 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 RPSAP60-201ENST00000415403 880 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 ELOCP14-201ENST00000428070 331 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 ANKRD54P1-201ENST00000433115 471 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC244505.2-201ENST00000435089 759 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AL954705.1-201ENST00000435277 559 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC073614.1-201ENST00000438690 650 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 ELOCP7-201ENST00000439968 331 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC092601.1-201ENST00000444526 383 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 RPL39P6-201ENST00000448289 150 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 snoU109.1-201ENST00000459339 135 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 RN7SL332P-201ENST00000482163 254 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 RNU6-430P-201ENST00000517078 107 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 PTTG3P-201ENST00000521862 606 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 OR5BK1P-201ENST00000550421 823 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AL161729.4-201ENST00000604650 476 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms