Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 U6.112-201ENST00000384129 70 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 RPL11P3-201ENST00000395256 523 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC107081.1-201ENST00000414975 361 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 RPA2P2-201ENST00000419698 796 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 GAPDHP19-201ENST00000431768 1005 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 NAP1L1P3-201ENST00000462291 880 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 RN7SL393P-201ENST00000463588 296 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 MTCYBP19-201ENST00000517463 1124 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 OR7E128P-201ENST00000532736 1024 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC145350.1-201ENST00000567426 208 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 ZNF322P1-201ENST00000568013 1209 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC119403.2-201ENST00000590960 598 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC008536.1-201ENST00000602872 669 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AL355974.3-201ENST00000617383 467 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC019072.1-201ENST00000604535 1551 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 RNU4-28P-201ENST00000364739 141 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 ATP5HP3-201ENST00000396994 486 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 PRELID1P1-201ENST00000403549 660 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AL354766.1-201ENST00000423396 542 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 PA2G4P6-201ENST00000438325 1197 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AC245291.3-201ENST00000443400 292 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AC023512.1-201ENST00000444513 499 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AC234771.2-201ENST00000445718 597 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 Z83846.1-201ENST00000446798 265 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 ZNF886P-201ENST00000450781 723 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 FRG2FP-204ENST00000453982 852 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 RPL12P39-201ENST00000455456 496 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 RPL6P9-201ENST00000466502 859 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 RPL7AP10-201ENST00000481016 791 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 RPL21P131-201ENST00000497298 483 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 GLUD1P3-202ENST00000508551 200 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 SNORA31.13-201ENST00000516624 135 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 RNA5SP434-201ENST00000516647 121 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 RNU6-1028P-201ENST00000517164 93 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AC013701.1-201ENST00000522657 465 ntBASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD4Q6ZW05 CASP1P2-201ENST00000526830 1258 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms