Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN20Q4JDL3 AC022417.1-201ENST00000624768 1303 ntBASIC5.43□□□□□ -1.54
PTPN20Q4JDL3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.43□□□□□ -1.54
PTPN20Q4JDL3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN20Q4JDL3 AP000473.2-201ENST00000602659 1537 ntBASIC5.43□□□□□ -1.54
PTPN20Q4JDL3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN20Q4JDL3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN20Q4JDL3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PTPN20Q4JDL3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 AL050305.1-201ENST00000399993 1230 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 RPL21P67-201ENST00000402896 478 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 MARK2P12-201ENST00000420129 585 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 AL389915.2-201ENST00000454576 441 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 RN7SL172P-201ENST00000460535 303 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 AC079841.1-201ENST00000481228 950 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 AC005412.2-201ENST00000492004 341 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 AL049874.2-201ENST00000492636 288 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 MYL12BP2-201ENST00000503948 512 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 SUMO2P4-201ENST00000504193 276 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 HIGD1AP14-201ENST00000507617 282 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN20Q4JDL3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 RNA5SP187-201ENST00000384400 119 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 AL035079.1-201ENST00000405210 287 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 RN7SKP126-201ENST00000411143 300 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 AP000534.2-201ENST00000412729 568 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 BX323845.1-201ENST00000432417 179 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 AC092647.2-201ENST00000452998 253 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 BX284632.1-201ENST00000478218 541 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 NPM1P28-201ENST00000492269 840 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 NPM1P21-201ENST00000513394 762 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 AP002373.2-201ENST00000541631 1060 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 AC090286.3-201ENST00000573133 187 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 AC004817.4-201ENST00000602396 3625 ntBASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PTPN20Q4JDL3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PTPN20Q4JDL3 AC133552.1-201ENST00000569988 4007 ntBASIC5.4□□□□□ -1.54
PTPN20Q4JDL3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN20Q4JDL3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN20Q4JDL3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN20Q4JDL3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN20Q4JDL3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN20Q4JDL3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms