Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5□□□□□ -1.61
HMGCS1Q01581 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGCS1Q01581 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HMGCS1Q01581 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGCS1Q01581 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 AC007342.5-201ENST00000571340 2142 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGCS1Q01581 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGCS1Q01581 RNU1-74P-201ENST00000384108 171 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 OR8V1P-201ENST00000395193 873 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 AL390316.1-201ENST00000406279 553 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 HMGN2P27-201ENST00000427352 270 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 FAM96AP1-201ENST00000430879 482 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 TCEA1P3-201ENST00000443005 880 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 RPS26P41-201ENST00000450370 284 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 OR2AF1P-201ENST00000454899 889 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 SIAH1P1-201ENST00000479411 923 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 EIF3LP3-201ENST00000495197 822 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 IGKV2-18-201ENST00000522607 343 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 AC006349.1-201ENST00000555526 235 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HMGCS1Q01581 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HMGCS1Q01581 RN7SL753P-201ENST00000581238 290 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 AC002069.2-201ENST00000603580 883 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 AL139041.1-201ENST00000605480 610 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.99□□□□□ -1.61
HMGCS1Q01581 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGCS1Q01581 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGCS1Q01581 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGCS1Q01581 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGCS1Q01581 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGCS1Q01581 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 MTCO1P11-201ENST00000429111 1528 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 SNORA51.1-201ENST00000363243 140 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 RNA5SP90-201ENST00000364801 99 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 AC009804.1-201ENST00000400949 179 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 AL035079.1-201ENST00000405210 287 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 RPS29P10-201ENST00000439197 166 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 AL133445.1-201ENST00000467051 452 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 NPM1P28-201ENST00000492269 840 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 BX510359.5-201ENST00000515651 304 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 RNU6-84P-201ENST00000607737 102 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 AC022467.1-201ENST00000614738 749 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 AC108359.1-201ENST00000616451 1211 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 AC074101.1-201ENST00000637861 241 ntBASIC4.98□□□□□ -1.61
HMGCS1Q01581 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGCS1Q01581 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS1Q01581 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.97□□□□□ -1.61
HMGCS1Q01581 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCS1Q01581 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCS1Q01581 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HMGCS1Q01581 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms