Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.52□□□□□ -1.85
PRKDCP78527 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 RNU1-130P-201ENST00000363930 160 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 MIR483-201ENST00000385070 76 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 UQCRBP1-201ENST00000421129 336 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 RPL37P1-201ENST00000432310 284 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 TPT1P3-201ENST00000492841 512 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKDCP78527 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKDCP78527 MIR6875-201ENST00000617506 72 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC3.52□□□□□ -1.85
PRKDCP78527 SPRR2C-201ENST00000290702 219 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 BOLA3P4-201ENST00000418151 400 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 ERG-210ENST00000442448 5034 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.52□□□□□ -1.85
PRKDCP78527 AC015795.1-201ENST00000513669 327 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKDCP78527 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.52□□□□□ -1.85
PRKDCP78527 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC3.52□□□□□ -1.85
PRKDCP78527 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PRKDCP78527 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 AL357515.1-201ENST00000402967 542 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 TPT1P2-201ENST00000413105 503 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 TCEA1P3-201ENST00000443005 880 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.52□□□□□ -1.85
PRKDCP78527 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKDCP78527 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.52□□□□□ -1.85
PRKDCP78527 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.52□□□□□ -1.85
PRKDCP78527 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC3.52□□□□□ -1.85
PRKDCP78527 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 AL359955.1-201ENST00000455242 3275 ntBASIC3.52□□□□□ -1.85
PRKDCP78527 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 CR1-203ENST00000367051 7469 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 CR1-204ENST00000367052 7469 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 CR1-205ENST00000367053 7469 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKDCP78527 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PRKDCP78527 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKDCP78527 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKDCP78527 ATP5HP3-201ENST00000396994 486 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 PPIAP9-201ENST00000403866 498 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 ARL4AP5-201ENST00000404372 599 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKDCP78527 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKDCP78527 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKDCP78527 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKDCP78527 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKDCP78527 SOD1P3-201ENST00000518682 454 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PRKDCP78527 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKDCP78527 RN7SL435P-201ENST00000584418 282 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKDCP78527 AC007179.3-201ENST00000604976 235 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 AL353729.2-201ENST00000605859 1249 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKDCP78527 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PRKDCP78527 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PRKDCP78527 AL355596.1-201ENST00000565399 3996 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKDCP78527 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRKDCP78527 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PRKDCP78527 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRKDCP78527 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PRKDCP78527 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRKDCP78527 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKDCP78527 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PRKDCP78527 U3.10-201ENST00000364459 214 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 AC007068.1-201ENST00000396690 844 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 AC018644.1-201ENST00000429934 551 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 AL157884.3-201ENST00000448273 1184 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 SNORD125-201ENST00000459538 96 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKDCP78527 AGGF1P6-201ENST00000569213 976 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 AC012442.3-202ENST00000636742 206 ntBASIC3.51□□□□□ -1.85
PRKDCP78527 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRKDCP78527 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRKDCP78527 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms