Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AL121594.2-201ENST00000541658 472 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 NOP56P3-201ENST00000549457 385 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A1P61619 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A1P61619 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
SEC61A1P61619 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AC006363.1-201ENST00000603806 463 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AL133481.2-203ENST00000607558 139 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AC112503.1-201ENST00000608436 391 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 MIR6809-201ENST00000612189 116 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AC096861.1-201ENST00000616652 240 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 MIR6133-201ENST00000617057 108 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AC129778.1-202ENST00000623812 261 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AC136428.4-201ENST00000634254 1155 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AL591379.1-207ENST00000635982 261 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A1P61619 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SEC61A1P61619 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
SEC61A1P61619 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A1P61619 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SEC61A1P61619 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
SEC61A1P61619 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 RNU4-27P-201ENST00000410889 139 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 RN7SKP279-201ENST00000411383 298 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 VPS26BP1-201ENST00000417155 755 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 BMS1P13-201ENST00000417301 885 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A1P61619 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A1P61619 NDUFS5P5-201ENST00000437256 321 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.02□□□□□ -1.61
SEC61A1P61619 RPS23P9-201ENST00000448848 438 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A1P61619 AC016724.1-201ENST00000453215 421 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 ACA64.1-201ENST00000459171 127 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AC084754.1-201ENST00000463466 464 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 RN7SL269P-201ENST00000467795 305 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AC083795.1-201ENST00000491760 320 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A1P61619 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A1P61619 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A1P61619 UGT2A3P7-201ENST00000510485 734 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A1P61619 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A1P61619 RNU5A-7P-201ENST00000515979 116 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A1P61619 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.02□□□□□ -1.61
SEC61A1P61619 OR5D2P-201ENST00000524390 911 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A1P61619 AP003066.2-201ENST00000529375 555 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A1P61619 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A1P61619 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A1P61619 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.02□□□□□ -1.61
SEC61A1P61619 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A1P61619 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A1P61619 AC090236.2-201ENST00000587933 1101 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A1P61619 AC027243.2-201ENST00000602530 724 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AC098935.2-201ENST00000604222 466 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 FAM72A-208ENST00000607379 1139 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AC097065.2-201ENST00000608159 533 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AL159169.2-201ENST00000610061 1269 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AL021918.2-201ENST00000613415 194 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 AC108359.1-201ENST00000616451 1211 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms