Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MTND4P4-201ENST00000439033 1366 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 MTND5P23-201ENST00000430812 1655 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
CLRN1P58418 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 SEC63P2-201ENST00000503863 1939 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 AP001541.1-201ENST00000623322 1904 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 AC110373.1-201ENST00000505994 3505 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 RPL11P4-201ENST00000332269 436 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 RNU6-543P-201ENST00000362576 108 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 PRELID1P1-201ENST00000403549 660 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC013404.1-201ENST00000413068 249 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.57□□□□□ -1.52
CLRN1P58418 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.57□□□□□ -1.52
CLRN1P58418 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC010153.1-201ENST00000432862 727 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC016908.1-201ENST00000442571 1219 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 CXCR2P1-202ENST00000443392 1074 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC005002.1-201ENST00000447458 540 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.57□□□□□ -1.52
CLRN1P58418 RPS27AP2-201ENST00000457576 465 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 RN7SL326P-201ENST00000477493 296 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 LINC00888-204ENST00000487386 421 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.57□□□□□ -1.52
CLRN1P58418 MRPL57P6-201ENST00000506570 309 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 MRPS5P3-201ENST00000515577 166 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 AC138517.1-201ENST00000515724 568 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC027104.1-201ENST00000563702 681 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC090616.2-202ENST00000584248 222 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 AL590229.1-201ENST00000603497 542 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 RNU6-84P-201ENST00000607737 102 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 AC072039.2-201ENST00000608883 439 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC068792.1-201ENST00000621354 417 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 AC089999.3-201ENST00000622440 577 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLRN1P58418 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLRN1P58418 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
CLRN1P58418 SGO1P1-201ENST00000603525 1447 ntBASIC5.57□□□□□ -1.52
CLRN1P58418 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.56□□□□□ -1.52
CLRN1P58418 CASC19-246ENST00000641625 1606 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 AL161901.1-201ENST00000624954 3425 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 ZNF733P-202ENST00000444809 1573 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AC092692.1-201ENST00000623625 2595 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLRN1P58418 METTL21EP-201ENST00000298105 713 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 FAM3C2-201ENST00000312214 681 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLRN1P58418 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLRN1P58418 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 RNU6-452P-201ENST00000384406 107 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 370 ms