Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 MIR4502-201ENST00000580432 81 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.85□□□□□ -1.79
FOXA3P55318 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
FOXA3P55318 AC015802.2-201ENST00000589690 189 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 AC008814.1-201ENST00000603797 406 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 MIR6737-201ENST00000617385 70 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 AC118658.2-201ENST00000618697 459 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 AC007204.1-201ENST00000621794 555 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 AC008691.1-209ENST00000642094 814 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXA3P55318 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 AL672167.1-203ENST00000641299 2975 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXA3P55318 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
FOXA3P55318 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXA3P55318 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXA3P55318 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXA3P55318 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXA3P55318 AC092435.4-201ENST00000623012 4159 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
FOXA3P55318 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXA3P55318 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
FOXA3P55318 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
FOXA3P55318 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
FOXA3P55318 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC3.84□□□□□ -1.79
FOXA3P55318 LSM5-203ENST00000409782 649 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXA3P55318 AC245060.4-201ENST00000413293 1121 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AL035660.1-201ENST00000422041 222 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 NMNAT1P2-201ENST00000435192 860 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXA3P55318 AC064862.5-201ENST00000440618 334 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AC005297.1-201ENST00000444765 862 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXA3P55318 AC022795.1-201ENST00000473808 480 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
FOXA3P55318 NIP7P2-201ENST00000485801 544 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AC091874.2-201ENST00000505889 720 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXA3P55318 NACAP5-201ENST00000509863 636 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AC114781.3-201ENST00000512083 142 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 OR5H7P-201ENST00000514084 930 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.84□□□□□ -1.79
FOXA3P55318 IGHVIII-11-1-201ENST00000522733 267 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC3.84□□□□□ -1.79
FOXA3P55318 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXA3P55318 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXA3P55318 YWHABP2-201ENST00000540201 713 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXA3P55318 AC090022.1-201ENST00000546569 311 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 IGBP1P1-201ENST00000554337 1009 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AC018552.1-201ENST00000562099 811 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AC060766.1-201ENST00000590824 627 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AC012616.1-201ENST00000600294 197 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 PPATP2-201ENST00000605635 508 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXA3P55318 AP001437.1-201ENST00000608783 456 ntBASIC3.84□□□□□ -1.79
FOXA3P55318 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXA3P55318 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXA3P55318 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXA3P55318 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXA3P55318 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXA3P55318 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
FOXA3P55318 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXA3P55318 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXA3P55318 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
FOXA3P55318 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.84□□□□□ -1.8
FOXA3P55318 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.84□□□□□ -1.8
FOXA3P55318 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.84□□□□□ -1.8
FOXA3P55318 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
FOXA3P55318 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.83□□□□□ -1.8
FOXA3P55318 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXA3P55318 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
FOXA3P55318 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
FOXA3P55318 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXA3P55318 RN7SKP224-201ENST00000364140 325 ntBASIC3.83□□□□□ -1.8
FOXA3P55318 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXA3P55318 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXA3P55318 SNORA68.2-201ENST00000391263 128 ntBASIC3.83□□□□□ -1.8
FOXA3P55318 OR8V1P-201ENST00000395193 873 ntBASIC3.83□□□□□ -1.8
FOXA3P55318 MIR1203-201ENST00000408812 85 ntBASIC3.83□□□□□ -1.8
FOXA3P55318 OR2AT2P-201ENST00000413438 905 ntBASIC3.83□□□□□ -1.8
FOXA3P55318 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXA3P55318 AC127526.2-201ENST00000426436 775 ntBASIC3.83□□□□□ -1.8
FOXA3P55318 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC3.83□□□□□ -1.8
FOXA3P55318 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXA3P55318 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC3.83□□□□□ -1.8
FOXA3P55318 RPS26P2-201ENST00000440331 348 ntBASIC3.83□□□□□ -1.8
FOXA3P55318 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.83□□□□□ -1.8
FOXA3P55318 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.83□□□□□ -1.8
FOXA3P55318 RPL7P40-201ENST00000481703 745 ntBASIC3.83□□□□□ -1.8
FOXA3P55318 RBBP4P1-201ENST00000502424 1276 ntBASIC3.83□□□□□ -1.8
FOXA3P55318 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.83□□□□□ -1.8
FOXA3P55318 RNU6-615P-201ENST00000516065 106 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms