Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.86□□□□□ -1.47
CLCN3P51790 AC244107.2-201ENST00000611773 76 ntBASIC5.86□□□□□ -1.47
CLCN3P51790 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLCN3P51790 AC009163.6-201ENST00000612367 342 ntBASIC5.86□□□□□ -1.47
CLCN3P51790 AC073575.2-201ENST00000614212 627 ntBASIC5.86□□□□□ -1.47
CLCN3P51790 HPVC1-201ENST00000629899 1198 ntBASIC5.86□□□□□ -1.47
CLCN3P51790 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CLCN3P51790 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.86□□□□□ -1.47
CLCN3P51790 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CLCN3P51790 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.86□□□□□ -1.47
CLCN3P51790 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
CLCN3P51790 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.86□□□□□ -1.47
CLCN3P51790 AC087565.3-202ENST00000642085 1603 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.85□□□□□ -1.47
CLCN3P51790 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 SAMMSON-210ENST00000641260 1308 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLCN3P51790 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLCN3P51790 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLCN3P51790 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.85□□□□□ -1.47
CLCN3P51790 NDUFB4P8-201ENST00000435351 367 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.85□□□□□ -1.47
CLCN3P51790 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.85□□□□□ -1.47
CLCN3P51790 PSAT1P4-201ENST00000466500 526 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 RPL7P40-201ENST00000481703 745 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 RWDD4P1-201ENST00000488019 565 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 OR9N1P-201ENST00000491296 333 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.85□□□□□ -1.47
CLCN3P51790 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.85□□□□□ -1.47
CLCN3P51790 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.85□□□□□ -1.47
CLCN3P51790 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.85□□□□□ -1.47
CLCN3P51790 COL6A4P2-205ENST00000509855 506 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.85□□□□□ -1.47
CLCN3P51790 AC110775.1-201ENST00000513721 462 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.85□□□□□ -1.47
CLCN3P51790 AC134349.2-201ENST00000535136 910 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.85□□□□□ -1.47
CLCN3P51790 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.85□□□□□ -1.47
CLCN3P51790 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.85□□□□□ -1.47
CLCN3P51790 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.85□□□□□ -1.47
CLCN3P51790 AC005252.1-201ENST00000604518 1063 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.85□□□□□ -1.47
CLCN3P51790 AL031658.2-201ENST00000616850 651 ntBASIC5.85□□□□□ -1.47
CLCN3P51790 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLCN3P51790 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLCN3P51790 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.85□□□□□ -1.47
CLCN3P51790 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLCN3P51790 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.85□□□□□ -1.47
CLCN3P51790 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCN3P51790 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCN3P51790 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.84□□□□□ -1.47
CLCN3P51790 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.84□□□□□ -1.47
CLCN3P51790 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
CLCN3P51790 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 AC092747.4-201ENST00000620519 1861 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.84□□□□□ -1.47
CLCN3P51790 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.84□□□□□ -1.47
CLCN3P51790 AC211486.3-201ENST00000412694 621 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 EI24P4-201ENST00000423683 1078 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCN3P51790 CR848007.2-201ENST00000424918 787 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 AC073850.1-201ENST00000449243 255 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCN3P51790 AC083899.1-201ENST00000454465 3819 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 AC109462.1-201ENST00000491087 368 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCN3P51790 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.84□□□□□ -1.47
CLCN3P51790 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.84□□□□□ -1.47
CLCN3P51790 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.84□□□□□ -1.47
CLCN3P51790 EIF3KP3-201ENST00000514461 639 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.84□□□□□ -1.47
CLCN3P51790 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.84□□□□□ -1.47
CLCN3P51790 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.84□□□□□ -1.47
CLCN3P51790 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 AC012414.2-201ENST00000559474 187 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.84□□□□□ -1.47
CLCN3P51790 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.84□□□□□ -1.47
CLCN3P51790 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCN3P51790 AL139124.1-201ENST00000609123 421 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.84□□□□□ -1.47
CLCN3P51790 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLCN3P51790 AC063952.1-203ENST00000634410 658 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 AC099654.6-201ENST00000636487 512 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 AC000095.2-202ENST00000637415 154 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 AC119674.1-220ENST00000641502 1048 ntBASIC5.84□□□□□ -1.47
CLCN3P51790 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms