Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.36□□□□□ -1.55
BRCA2P51587 YME1L1P1-201ENST00000429435 297 ntBASIC5.36□□□□□ -1.55
BRCA2P51587 ARL4AP4-201ENST00000434170 518 ntBASIC5.36□□□□□ -1.55
BRCA2P51587 AC090506.2-201ENST00000624521 419 ntBASIC5.36□□□□□ -1.55
BRCA2P51587 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.36□□□□□ -1.55
BRCA2P51587 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
BRCA2P51587 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.36□□□□□ -1.55
BRCA2P51587 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRCA2P51587 AC114814.2-201ENST00000419195 485 ntBASIC5.36□□□□□ -1.55
BRCA2P51587 AC091959.2-201ENST00000477363 321 ntBASIC5.36□□□□□ -1.55
BRCA2P51587 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.36□□□□□ -1.55
BRCA2P51587 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.36□□□□□ -1.55
BRCA2P51587 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.36□□□□□ -1.55
BRCA2P51587 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC5.36□□□□□ -1.55
BRCA2P51587 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRCA2P51587 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC5.36□□□□□ -1.55
BRCA2P51587 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRCA2P51587 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
BRCA2P51587 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRCA2P51587 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC5.36□□□□□ -1.55
BRCA2P51587 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.36□□□□□ -1.55
BRCA2P51587 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
BRCA2P51587 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
BRCA2P51587 AC010547.7-201ENST00000570323 333 ntBASIC5.36□□□□□ -1.55
BRCA2P51587 AC011471.1-201ENST00000585766 187 ntBASIC5.36□□□□□ -1.55
BRCA2P51587 AC010424.2-201ENST00000607594 443 ntBASIC5.36□□□□□ -1.55
BRCA2P51587 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRCA2P51587 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRCA2P51587 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.36□□□□□ -1.55
BRCA2P51587 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
BRCA2P51587 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
BRCA2P51587 AC073365.1-203ENST00000641055 1992 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.35□□□□□ -1.55
BRCA2P51587 PCDHA10-203ENST00000562220 12358 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.35□□□□□ -1.55
BRCA2P51587 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.35□□□□□ -1.55
BRCA2P51587 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.35□□□□□ -1.55
BRCA2P51587 RPS27AP16-201ENST00000492222 470 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 AC108475.1-201ENST00000507880 950 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 BUD31P1-201ENST00000521828 359 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.35□□□□□ -1.55
BRCA2P51587 AC107016.1-201ENST00000550463 337 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 HNRNPCP4-201ENST00000571636 900 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 MITF-203ENST00000328528 4680 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCA2P51587 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCA2P51587 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
BRCA2P51587 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 SNORA63.1-201ENST00000362493 131 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 AC093578.1-201ENST00000415219 368 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 RN7SL189P-201ENST00000468631 289 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.35□□□□□ -1.55
BRCA2P51587 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.35□□□□□ -1.55
BRCA2P51587 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.35□□□□□ -1.55
BRCA2P51587 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 AP005901.4-201ENST00000577336 569 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.35□□□□□ -1.55
BRCA2P51587 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 FP325330.3-201ENST00000623760 9537 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
BRCA2P51587 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.35□□□□□ -1.55
BRCA2P51587 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.35□□□□□ -1.55
BRCA2P51587 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
BRCA2P51587 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.35□□□□□ -1.55
BRCA2P51587 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.35□□□□□ -1.55
BRCA2P51587 SEPT10P1-201ENST00000517342 1162 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.35□□□□□ -1.55
BRCA2P51587 AC106782.4-201ENST00000568264 210 ntBASIC5.35□□□□□ -1.55
BRCA2P51587 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCA2P51587 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCA2P51587 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.35□□□□□ -1.55
BRCA2P51587 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCA2P51587 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCA2P51587 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRCA2P51587 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCA2P51587 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.34□□□□□ -1.55
BRCA2P51587 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCA2P51587 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
BRCA2P51587 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.34□□□□□ -1.55
BRCA2P51587 U3.28-201ENST00000391249 210 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 AL132765.1-201ENST00000434165 553 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 RN7SL810P-201ENST00000493031 276 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 RPS24P16-201ENST00000497294 392 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.34□□□□□ -1.55
BRCA2P51587 MIR5699-201ENST00000578903 90 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 AC008739.3-201ENST00000603262 127 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.34□□□□□ -1.55
BRCA2P51587 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms