Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.3□□□□□ -1.56
CENPAP49450 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.3□□□□□ -1.56
CENPAP49450 ZNF322P1-201ENST00000568013 1209 ntBASIC5.3□□□□□ -1.56
CENPAP49450 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.3□□□□□ -1.56
CENPAP49450 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.3□□□□□ -1.56
CENPAP49450 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.3□□□□□ -1.56
CENPAP49450 AC034236.3-201ENST00000605999 461 ntBASIC5.3□□□□□ -1.56
CENPAP49450 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.3□□□□□ -1.56
CENPAP49450 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 MIR6813-201ENST00000621638 56 ntBASIC5.3□□□□□ -1.56
CENPAP49450 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.3□□□□□ -1.56
CENPAP49450 AP003485.1-201ENST00000625093 753 ntBASIC5.3□□□□□ -1.56
CENPAP49450 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.3□□□□□ -1.56
CENPAP49450 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.3□□□□□ -1.56
CENPAP49450 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.3□□□□□ -1.56
CENPAP49450 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CENPAP49450 HSPD1P9-201ENST00000420325 1636 ntBASIC5.3□□□□□ -1.56
CENPAP49450 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.3□□□□□ -1.56
CENPAP49450 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 AL450326.2-201ENST00000421913 1962 ntBASIC5.29□□□□□ -1.56
CENPAP49450 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CENPAP49450 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CENPAP49450 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 AP004607.3-201ENST00000530354 3915 ntBASIC5.29□□□□□ -1.56
CENPAP49450 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CENPAP49450 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CENPAP49450 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 RN7SKP146-201ENST00000410242 334 ntBASIC5.29□□□□□ -1.56
CENPAP49450 BX664727.1-201ENST00000416024 466 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.29□□□□□ -1.56
CENPAP49450 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 RNGTTP1-201ENST00000420965 728 ntBASIC5.29□□□□□ -1.56
CENPAP49450 Z82198.3-201ENST00000421145 199 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 AL160175.1-201ENST00000428124 247 ntBASIC5.29□□□□□ -1.56
CENPAP49450 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.29□□□□□ -1.56
CENPAP49450 NDUFA5P10-201ENST00000432147 357 ntBASIC5.29□□□□□ -1.56
CENPAP49450 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 AL663074.2-201ENST00000440621 479 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 AC007383.1-201ENST00000445875 636 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 FRG2FP-204ENST00000453982 852 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AC098847.1-201ENST00000473094 348 ntBASIC5.29□□□□□ -1.56
CENPAP49450 OR5H3P-201ENST00000502817 919 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AC112484.3-201ENST00000505910 329 ntBASIC5.29□□□□□ -1.56
CENPAP49450 GAPDHP71-201ENST00000511530 1003 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.29□□□□□ -1.56
CENPAP49450 BUD31P1-201ENST00000521828 359 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 AC090424.1-201ENST00000535243 736 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.29□□□□□ -1.56
CENPAP49450 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.29□□□□□ -1.56
CENPAP49450 AL078601.3-201ENST00000573303 535 ntBASIC5.29□□□□□ -1.56
CENPAP49450 DHFRP1-201ENST00000579682 559 ntBASIC5.29□□□□□ -1.56
CENPAP49450 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 AL021918.2-201ENST00000613415 194 ntBASIC5.29□□□□□ -1.56
CENPAP49450 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AC244100.4-201ENST00000617747 388 ntBASIC5.29□□□□□ -1.56
CENPAP49450 FAM27E2-201ENST00000619668 403 ntBASIC5.29□□□□□ -1.56
CENPAP49450 AC091046.2-201ENST00000620775 665 ntBASIC5.29□□□□□ -1.56
CENPAP49450 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 AC073488.6-201ENST00000632293 754 ntBASIC5.29□□□□□ -1.56
CENPAP49450 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 AC091305.2-201ENST00000624049 1576 ntBASIC5.29□□□□□ -1.56
CENPAP49450 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CENPAP49450 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.29□□□□□ -1.56
CENPAP49450 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms