Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF9P41273 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFSF9P41273 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF9P41273 GVINP1-202ENST00000531871 7271 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TNFSF9P41273 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF9P41273 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
TNFSF9P41273 SMG1P7-201ENST00000565246 2704 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF9P41273 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TNFSF9P41273 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF9P41273 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
TNFSF9P41273 RN7SKP104-201ENST00000362605 328 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 AL353625.1-202ENST00000366273 571 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
TNFSF9P41273 SNORA2.3-201ENST00000383920 135 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 AL589647.1-201ENST00000402485 466 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF9P41273 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF9P41273 DDX39BP1-205ENST00000422507 192 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 AC009238.2-201ENST00000431026 355 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF9P41273 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF9P41273 CEACAMP7-201ENST00000444105 496 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 NDUFA5P8-201ENST00000449019 346 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 AL645937.3-201ENST00000453647 936 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 RN7SL443P-201ENST00000464331 290 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF9P41273 AC010350.1-201ENST00000504908 231 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 AC016559.2-201ENST00000510759 359 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF9P41273 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF9P41273 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF9P41273 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFSF9P41273 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFSF9P41273 AP002884.5-201ENST00000595053 1132 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 AC108359.1-201ENST00000616451 1211 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF9P41273 AP001153.1-201ENST00000641024 338 ntBASIC5.53□□□□□ -1.52
TNFSF9P41273 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF9P41273 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFSF9P41273 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF9P41273 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 AC120036.2-201ENST00000509729 1474 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFSF9P41273 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFSF9P41273 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.52□□□□□ -1.53
TNFSF9P41273 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFSF9P41273 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFSF9P41273 RNA5SP123-201ENST00000363244 119 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 MIR585-201ENST00000384887 94 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 AL109941.1-201ENST00000401925 229 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 AL035079.1-201ENST00000405210 287 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 RN7SKP125-201ENST00000410481 302 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.52□□□□□ -1.53
TNFSF9P41273 AL354766.1-201ENST00000423396 542 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFSF9P41273 AC002075.1-201ENST00000457396 676 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 snoU13.20-201ENST00000459180 104 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.52□□□□□ -1.53
TNFSF9P41273 RPL5P12-201ENST00000477071 851 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 RNA5SP43-201ENST00000516559 110 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFSF9P41273 AC019322.1-201ENST00000571869 389 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 OOSP1P2-201ENST00000579644 351 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 PRPF19P1-201ENST00000584766 898 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 Mico1.1-201ENST00000611698 204 ntBASIC5.52□□□□□ -1.53
TNFSF9P41273 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFSF9P41273 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.52□□□□□ -1.53
TNFSF9P41273 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TNFSF9P41273 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFSF9P41273 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFSF9P41273 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF9P41273 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF9P41273 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF9P41273 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFSF9P41273 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF9P41273 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFSF9P41273 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF9P41273 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms