Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DDX18P4-201ENST00000511690 1966 ntBASIC3.72□□□□□ -1.81
CKS2P33552 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CKS2P33552 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS2P33552 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.72□□□□□ -1.81
CKS2P33552 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC3.72□□□□□ -1.81
CKS2P33552 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
CKS2P33552 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CKS2P33552 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.72□□□□□ -1.81
CKS2P33552 AC000123.3-201ENST00000624029 4975 ntBASIC3.72□□□□□ -1.81
CKS2P33552 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS2P33552 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS2P33552 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC3.71□□□□□ -1.81
CKS2P33552 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.71□□□□□ -1.81
CKS2P33552 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.71□□□□□ -1.81
CKS2P33552 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
CKS2P33552 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CKS2P33552 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CKS2P33552 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS2P33552 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS2P33552 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CKS2P33552 COX6B1P3-201ENST00000312310 260 ntBASIC3.71□□□□□ -1.82
CKS2P33552 RNU4-44P-201ENST00000363050 141 ntBASIC3.71□□□□□ -1.82
CKS2P33552 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS2P33552 SNORA16A-201ENST00000384342 137 ntBASIC3.71□□□□□ -1.82
CKS2P33552 MIR1203-201ENST00000408812 85 ntBASIC3.71□□□□□ -1.82
CKS2P33552 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.71□□□□□ -1.82
CKS2P33552 Z93019.1-201ENST00000416450 973 ntBASIC3.71□□□□□ -1.82
CKS2P33552 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS2P33552 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS2P33552 RPS29P10-201ENST00000439197 166 ntBASIC3.71□□□□□ -1.82
CKS2P33552 AL450263.2-201ENST00000439400 589 ntBASIC3.71□□□□□ -1.82
CKS2P33552 RPS11P7-201ENST00000442125 465 ntBASIC3.71□□□□□ -1.82
CKS2P33552 RPL7AP61-201ENST00000443410 636 ntBASIC3.71□□□□□ -1.82
CKS2P33552 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS2P33552 MRPL48P1-201ENST00000445390 636 ntBASIC3.71□□□□□ -1.82
CKS2P33552 AC105399.1-202ENST00000447303 205 ntBASIC3.71□□□□□ -1.82
CKS2P33552 OTX2P1-201ENST00000450956 354 ntBASIC3.71□□□□□ -1.82
CKS2P33552 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS2P33552 AP000942.1-201ENST00000463969 747 ntBASIC3.71□□□□□ -1.82
CKS2P33552 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS2P33552 RBBP4P1-201ENST00000502424 1276 ntBASIC3.71□□□□□ -1.82
CKS2P33552 AC097173.1-201ENST00000505862 819 ntBASIC3.71□□□□□ -1.82
CKS2P33552 GUSBP9-201ENST00000510138 584 ntBASIC3.71□□□□□ -1.82
CKS2P33552 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS2P33552 Y_RNA.667-201ENST00000516212 107 ntBASIC3.71□□□□□ -1.82
CKS2P33552 RNA5SP464-201ENST00000516251 108 ntBASIC3.71□□□□□ -1.82
CKS2P33552 RNA5SP438-201ENST00000516561 112 ntBASIC3.71□□□□□ -1.82
CKS2P33552 AC113191.1-201ENST00000517759 403 ntBASIC3.71□□□□□ -1.82
CKS2P33552 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS2P33552 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 HMGN1P26-201ENST00000558737 303 ntBASIC3.71□□□□□ -1.82
CKS2P33552 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS2P33552 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS2P33552 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS2P33552 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 AP001437.1-201ENST00000608783 456 ntBASIC3.71□□□□□ -1.82
CKS2P33552 MIR6823-201ENST00000622118 61 ntBASIC3.71□□□□□ -1.82
CKS2P33552 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CKS2P33552 5S_rRNA.29-201ENST00000641250 107 ntBASIC3.71□□□□□ -1.82
CKS2P33552 AC097461.1-201ENST00000568928 2821 ntBASIC3.71□□□□□ -1.82
CKS2P33552 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CKS2P33552 MAPK10-349ENST00000641767 3661 ntBASIC3.71□□□□□ -1.82
CKS2P33552 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS2P33552 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS2P33552 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS2P33552 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
CKS2P33552 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CKS2P33552 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS2P33552 DDX18P5-201ENST00000534547 1306 ntBASIC3.7□□□□□ -1.82
CKS2P33552 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CKS2P33552 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CKS2P33552 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CKS2P33552 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS2P33552 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS2P33552 HMGB1P20-201ENST00000402555 677 ntBASIC3.7□□□□□ -1.82
CKS2P33552 AL592291.1-201ENST00000403830 352 ntBASIC3.7□□□□□ -1.82
CKS2P33552 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS2P33552 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS2P33552 MYB-206ENST00000420123 1051 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS2P33552 AC127526.2-201ENST00000426436 775 ntBASIC3.7□□□□□ -1.82
CKS2P33552 HSPE1P27-201ENST00000430808 296 ntBASIC3.7□□□□□ -1.82
CKS2P33552 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC3.7□□□□□ -1.82
CKS2P33552 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS2P33552 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.7□□□□□ -1.82
CKS2P33552 RPL21P6-201ENST00000479171 504 ntBASIC3.7□□□□□ -1.82
CKS2P33552 ARL4AP1-201ENST00000503220 705 ntBASIC3.7□□□□□ -1.82
CKS2P33552 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS2P33552 AC078878.1-201ENST00000539832 958 ntBASIC3.7□□□□□ -1.82
CKS2P33552 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC3.7□□□□□ -1.82
CKS2P33552 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CKS2P33552 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS2P33552 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms