Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CIITAP33076 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.1□□□□□ -1.43
CIITAP33076 AL158827.1-201ENST00000416300 391 ntBASIC6.1□□□□□ -1.43
CIITAP33076 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.1□□□□□ -1.43
CIITAP33076 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CIITAP33076 AC007064.3-201ENST00000422608 359 ntBASIC6.1□□□□□ -1.43
CIITAP33076 MTCO1P57-201ENST00000432182 261 ntBASIC6.1□□□□□ -1.43
CIITAP33076 AC138761.5-201ENST00000433967 325 ntBASIC6.1□□□□□ -1.43
CIITAP33076 GXYLT1P1-201ENST00000446657 490 ntBASIC6.1□□□□□ -1.43
CIITAP33076 MTND6P5-201ENST00000448266 512 ntBASIC6.1□□□□□ -1.43
CIITAP33076 RN7SL197P-201ENST00000466981 299 ntBASIC6.1□□□□□ -1.43
CIITAP33076 OR2AO1P-201ENST00000476497 403 ntBASIC6.1□□□□□ -1.43
CIITAP33076 AC012123.2-201ENST00000485809 248 ntBASIC6.1□□□□□ -1.43
CIITAP33076 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.1□□□□□ -1.43
CIITAP33076 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.1□□□□□ -1.43
CIITAP33076 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.1□□□□□ -1.43
CIITAP33076 RNU6-941P-201ENST00000516346 108 ntBASIC6.1□□□□□ -1.43
CIITAP33076 SNORA70.17-201ENST00000516449 133 ntBASIC6.1□□□□□ -1.43
CIITAP33076 AC104997.1-201ENST00000519761 717 ntBASIC6.1□□□□□ -1.43
CIITAP33076 YWHABP2-201ENST00000540201 713 ntBASIC6.1□□□□□ -1.43
CIITAP33076 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.1□□□□□ -1.43
CIITAP33076 AP000619.2-201ENST00000546014 969 ntBASIC6.1□□□□□ -1.43
CIITAP33076 AL049779.2-201ENST00000553847 315 ntBASIC6.1□□□□□ -1.43
CIITAP33076 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.1□□□□□ -1.43
CIITAP33076 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.1□□□□□ -1.43
CIITAP33076 RPL10P14-201ENST00000565265 298 ntBASIC6.1□□□□□ -1.43
CIITAP33076 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.1□□□□□ -1.43
CIITAP33076 AL355816.2-201ENST00000610049 647 ntBASIC6.1□□□□□ -1.43
CIITAP33076 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CIITAP33076 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CIITAP33076 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.1□□□□□ -1.43
CIITAP33076 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CIITAP33076 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
CIITAP33076 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.09□□□□□ -1.43
CIITAP33076 AL078621.3-201ENST00000623707 2042 ntBASIC6.09□□□□□ -1.43
CIITAP33076 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CIITAP33076 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CIITAP33076 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CIITAP33076 AL034549.2-201ENST00000618285 3373 ntBASIC6.09□□□□□ -1.43
CIITAP33076 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CIITAP33076 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.09□□□□□ -1.43
CIITAP33076 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CIITAP33076 AC005294.1-201ENST00000355509 281 ntBASIC6.09□□□□□ -1.43
CIITAP33076 U3.2-201ENST00000362981 210 ntBASIC6.09□□□□□ -1.43
CIITAP33076 RNU6-1331P-201ENST00000363658 106 ntBASIC6.09□□□□□ -1.43
CIITAP33076 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CIITAP33076 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.09□□□□□ -1.43
CIITAP33076 RPL35AP24-201ENST00000413846 330 ntBASIC6.09□□□□□ -1.43
CIITAP33076 GTF3AP1-201ENST00000416942 1004 ntBASIC6.09□□□□□ -1.43
CIITAP33076 BX276092.6-201ENST00000430476 250 ntBASIC6.09□□□□□ -1.43
CIITAP33076 OR52B5P-201ENST00000435337 951 ntBASIC6.09□□□□□ -1.43
CIITAP33076 RAB9AP5-201ENST00000437794 597 ntBASIC6.09□□□□□ -1.43
CIITAP33076 RAB9AP2-201ENST00000443911 597 ntBASIC6.09□□□□□ -1.43
CIITAP33076 REG1CP-206ENST00000447469 496 ntBASIC6.09□□□□□ -1.43
CIITAP33076 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.09□□□□□ -1.43
CIITAP33076 BX276092.8-201ENST00000455722 250 ntBASIC6.09□□□□□ -1.43
CIITAP33076 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.09□□□□□ -1.43
CIITAP33076 RN7SL177P-201ENST00000476596 299 ntBASIC6.09□□□□□ -1.43
CIITAP33076 AC015908.1-201ENST00000478739 476 ntBASIC6.09□□□□□ -1.43
CIITAP33076 RPL7P39-201ENST00000481157 744 ntBASIC6.09□□□□□ -1.43
CIITAP33076 AC058823.1-201ENST00000485315 474 ntBASIC6.09□□□□□ -1.43
CIITAP33076 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.09□□□□□ -1.43
CIITAP33076 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CIITAP33076 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.09□□□□□ -1.43
CIITAP33076 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.09□□□□□ -1.43
CIITAP33076 AL512329.2-201ENST00000607350 548 ntBASIC6.09□□□□□ -1.43
CIITAP33076 AL356608.1-201ENST00000610034 820 ntBASIC6.09□□□□□ -1.43
CIITAP33076 AC244107.2-201ENST00000611773 76 ntBASIC6.09□□□□□ -1.43
CIITAP33076 MIR6133-201ENST00000617057 108 ntBASIC6.09□□□□□ -1.43
CIITAP33076 AL162233.1-201ENST00000620014 944 ntBASIC6.09□□□□□ -1.43
CIITAP33076 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.09□□□□□ -1.43
CIITAP33076 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.09□□□□□ -1.43
CIITAP33076 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CIITAP33076 OR52B5P-202ENST00000641118 1110 ntBASIC6.09□□□□□ -1.43
CIITAP33076 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CIITAP33076 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.09□□□□□ -1.43
CIITAP33076 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CIITAP33076 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
CIITAP33076 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CIITAP33076 PABPC1P6-201ENST00000445594 1829 ntBASIC6.09□□□□□ -1.44
CIITAP33076 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.09□□□□□ -1.44
CIITAP33076 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CIITAP33076 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.08□□□□□ -1.44
CIITAP33076 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CIITAP33076 RNU6-171P-201ENST00000384354 107 ntBASIC6.08□□□□□ -1.44
CIITAP33076 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CIITAP33076 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.08□□□□□ -1.44
CIITAP33076 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CIITAP33076 MARK2P12-201ENST00000420129 585 ntBASIC6.08□□□□□ -1.44
CIITAP33076 REREP1Y-201ENST00000422655 198 ntBASIC6.08□□□□□ -1.44
CIITAP33076 AL034379.1-201ENST00000423216 253 ntBASIC6.08□□□□□ -1.44
CIITAP33076 AC108075.1-201ENST00000424692 529 ntBASIC6.08□□□□□ -1.44
CIITAP33076 AC093655.2-201ENST00000425735 631 ntBASIC6.08□□□□□ -1.44
CIITAP33076 AC074367.1-201ENST00000438685 1125 ntBASIC6.08□□□□□ -1.44
CIITAP33076 REREP2Y-201ENST00000439103 200 ntBASIC6.08□□□□□ -1.44
CIITAP33076 AL359265.1-201ENST00000440296 795 ntBASIC6.08□□□□□ -1.44
CIITAP33076 AC023271.1-201ENST00000445936 1090 ntBASIC6.08□□□□□ -1.44
CIITAP33076 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.08□□□□□ -1.44
CIITAP33076 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CIITAP33076 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms