Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC093783.1-201ENST00000612976 329 ntBASIC6.01□□□□□ -1.45
SLC6A4P31645 AC021755.4-201ENST00000616620 456 ntBASIC6.01□□□□□ -1.45
SLC6A4P31645 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC6A4P31645 MIR6886-201ENST00000619864 61 ntBASIC6.01□□□□□ -1.45
SLC6A4P31645 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SLC6A4P31645 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.01□□□□□ -1.45
SLC6A4P31645 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC6A4P31645 AL161756.3-201ENST00000641216 2071 ntBASIC6.01□□□□□ -1.45
SLC6A4P31645 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SLC6A4P31645 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SLC6A4P31645 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.01□□□□□ -1.45
SLC6A4P31645 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SLC6A4P31645 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SLC6A4P31645 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SLC6A4P31645 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SLC6A4P31645 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC6A4P31645 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC6A4P31645 AL355578.1-201ENST00000607405 1328 ntBASIC6□□□□□ -1.45
SLC6A4P31645 MFSD8-213ENST00000641134 1327 ntBASIC6□□□□□ -1.45
SLC6A4P31645 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC6A4P31645 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6□□□□□ -1.45
SLC6A4P31645 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6□□□□□ -1.45
SLC6A4P31645 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC6A4P31645 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6□□□□□ -1.45
SLC6A4P31645 SNORD56.4-201ENST00000363883 71 ntBASIC6□□□□□ -1.45
SLC6A4P31645 RNA5SP394-201ENST00000364216 119 ntBASIC6□□□□□ -1.45
SLC6A4P31645 RNA5-8SP5-201ENST00000365304 152 ntBASIC6□□□□□ -1.45
SLC6A4P31645 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC6A4P31645 CD2-201ENST00000369477 478 ntTSL 2 BASIC6□□□□□ -1.45
SLC6A4P31645 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6□□□□□ -1.45
SLC6A4P31645 SNORA17A-201ENST00000391185 133 ntBASIC6□□□□□ -1.45
SLC6A4P31645 HMGB1P20-201ENST00000402555 677 ntBASIC6□□□□□ -1.45
SLC6A4P31645 RN7SKP229-201ENST00000410465 302 ntBASIC6□□□□□ -1.45
SLC6A4P31645 TRIM60P5Y-201ENST00000413946 574 ntBASIC6□□□□□ -1.45
SLC6A4P31645 XIST-201ENST00000416330 750 ntTSL 2 BASIC6□□□□□ -1.45
SLC6A4P31645 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6□□□□□ -1.45
SLC6A4P31645 AK4P4-201ENST00000419465 646 ntBASIC6□□□□□ -1.45
SLC6A4P31645 SLC4A1APP1-201ENST00000419995 602 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6□□□□□ -1.45
SLC6A4P31645 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6□□□□□ -1.45
SLC6A4P31645 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6□□□□□ -1.45
SLC6A4P31645 HMGB3P24-201ENST00000433260 622 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6□□□□□ -1.45
SLC6A4P31645 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6□□□□□ -1.45
SLC6A4P31645 H3F3BP1-201ENST00000440551 403 ntBASIC6□□□□□ -1.45
SLC6A4P31645 CR769776.1-201ENST00000441254 787 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC064862.4-201ENST00000442180 334 ntBASIC6□□□□□ -1.45
SLC6A4P31645 MTND2P22-201ENST00000444325 1033 ntBASIC6□□□□□ -1.45
SLC6A4P31645 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6□□□□□ -1.45
SLC6A4P31645 AL161636.2-201ENST00000445179 927 ntBASIC6□□□□□ -1.45
SLC6A4P31645 NDUFAF4P2-201ENST00000445374 520 ntBASIC6□□□□□ -1.45
SLC6A4P31645 HMGN1P36-201ENST00000446623 298 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6□□□□□ -1.45
SLC6A4P31645 RN7SL273P-201ENST00000481561 299 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6□□□□□ -1.45
SLC6A4P31645 GOLGA5P1-201ENST00000507317 980 ntBASIC6□□□□□ -1.45
SLC6A4P31645 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC6A4P31645 TOMM22P4-201ENST00000511318 336 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6□□□□□ -1.45
SLC6A4P31645 AC139365.2-201ENST00000517972 253 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6□□□□□ -1.45
SLC6A4P31645 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6□□□□□ -1.45
SLC6A4P31645 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SLC6A4P31645 OR4A6P-201ENST00000534364 970 ntBASIC6□□□□□ -1.45
SLC6A4P31645 DPPA2P4-201ENST00000563717 878 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC023824.3-201ENST00000569003 562 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC005224.3-201ENST00000584683 2140 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6□□□□□ -1.45
SLC6A4P31645 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6□□□□□ -1.45
SLC6A4P31645 AC009237.12-201ENST00000604755 742 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC231759.1-201ENST00000616455 597 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC006386.1-201ENST00000619436 415 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC022079.2-201ENST00000619739 566 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AP003485.2-201ENST00000623636 610 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC026422.1-201ENST00000623961 452 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC079416.3-201ENST00000624479 549 ntBASIC6□□□□□ -1.45
SLC6A4P31645 SNORA17.5-201ENST00000630429 132 ntBASIC6□□□□□ -1.45
SLC6A4P31645 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6□□□□□ -1.45
SLC6A4P31645 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6□□□□□ -1.45
SLC6A4P31645 MIR193BHG-214ENST00000641765 509 ntBASIC6□□□□□ -1.45
SLC6A4P31645 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6□□□□□ -1.45
SLC6A4P31645 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6□□□□□ -1.45
SLC6A4P31645 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6□□□□□ -1.45
SLC6A4P31645 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6□□□□□ -1.45
SLC6A4P31645 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC6A4P31645 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6□□□□□ -1.45
SLC6A4P31645 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC6A4P31645 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SLC6A4P31645 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC6A4P31645 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC6A4P31645 AC005261.2-201ENST00000593427 4258 ntBASIC5.99□□□□□ -1.45
SLC6A4P31645 MTCO1P11-201ENST00000429111 1528 ntBASIC5.99□□□□□ -1.45
SLC6A4P31645 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC6A4P31645 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC6A4P31645 AC007842.1-201ENST00000597336 2039 ntBASIC5.99□□□□□ -1.45
SLC6A4P31645 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC6A4P31645 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SLC6A4P31645 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC6A4P31645 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SLC6A4P31645 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms