Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC13P31276 AC025574.2-201ENST00000615621 514 ntBASIC5.79□□□□□ -1.48
HOXC13P31276 AC006213.4-201ENST00000616184 634 ntBASIC5.79□□□□□ -1.48
HOXC13P31276 AL133370.2-201ENST00000619934 439 ntBASIC5.79□□□□□ -1.48
HOXC13P31276 AC000095.2-202ENST00000637415 154 ntBASIC5.79□□□□□ -1.48
HOXC13P31276 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC13P31276 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HOXC13P31276 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC13P31276 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HOXC13P31276 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC13P31276 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC13P31276 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC13P31276 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC13P31276 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC13P31276 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
HOXC13P31276 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC13P31276 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC13P31276 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
HOXC13P31276 OR4F13P-202ENST00000560066 2054 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HOXC13P31276 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXC13P31276 RNA5SP507-201ENST00000363603 121 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC13P31276 RNU6-178P-201ENST00000384631 104 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 VDAC2P1-201ENST00000399358 958 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
HOXC13P31276 RN7SKP125-201ENST00000410481 302 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC13P31276 CYCSP6-201ENST00000434498 302 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC13P31276 RPL31P20-201ENST00000449593 360 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC13P31276 RPS23P1-201ENST00000491662 432 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXC13P31276 AC090638.1-201ENST00000498296 909 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC13P31276 AC093890.1-201ENST00000502554 540 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC13P31276 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC13P31276 PMS2P3-207ENST00000529061 717 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 AC084824.2-201ENST00000548906 345 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC13P31276 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HOXC13P31276 AC015720.2-201ENST00000567709 334 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC13P31276 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC13P31276 PPATP2-201ENST00000605635 508 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 AC132068.1-201ENST00000623805 459 ntBASIC5.78□□□□□ -1.48
HOXC13P31276 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC13P31276 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HOXC13P31276 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HOXC13P31276 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC13P31276 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC13P31276 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC13P31276 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HOXC13P31276 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC13P31276 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC13P31276 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
HOXC13P31276 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC13P31276 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC13P31276 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC13P31276 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
HOXC13P31276 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC13P31276 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
HOXC13P31276 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC13P31276 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC13P31276 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
HOXC13P31276 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC13P31276 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC13P31276 RNA5SP183-201ENST00000362452 119 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC13P31276 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC13P31276 RNU1-106P-201ENST00000384382 164 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 MIR223-201ENST00000385204 110 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HOXC13P31276 NCSTNP1-201ENST00000406229 144 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC13P31276 AC007161.1-204ENST00000423039 460 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 AJ239321.1-201ENST00000424255 564 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC13P31276 OR52B5P-201ENST00000435337 951 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXC13P31276 BUD31P2-201ENST00000449374 300 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 FAR2P1-206ENST00000449736 709 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC13P31276 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC13P31276 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXC13P31276 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC13P31276 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXC13P31276 RPSAP50-201ENST00000481955 852 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 AC090058.1-201ENST00000498788 435 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC13P31276 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC13P31276 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC13P31276 OR10D4P-201ENST00000525892 951 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXC13P31276 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXC13P31276 AC004825.1-201ENST00000555068 586 ntBASIC5.77□□□□□ -1.49
HOXC13P31276 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC13P31276 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms