Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 RNU6-311P-201ENST00000516224 102 ntBASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AL356801.1-201ENST00000559320 294 ntBASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AC002519.2-203ENST00000567043 837 ntBASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AC090236.2-201ENST00000587933 1101 ntBASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AC002487.1-201ENST00000604565 994 ntBASIC5.21□□□□□ -1.58
TNFRSF1BP20333 FAM27E4-201ENST00000605259 342 ntBASIC5.21□□□□□ -1.58
TNFRSF1BP20333 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AC112694.2-201ENST00000623697 768 ntBASIC5.21□□□□□ -1.58
TNFRSF1BP20333 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 AC007842.1-201ENST00000597336 2039 ntBASIC5.21□□□□□ -1.58
TNFRSF1BP20333 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
TNFRSF1BP20333 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 GVINP1-202ENST00000531871 7271 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 MAPK10-328ENST00000641553 4009 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 GAPDHP24-201ENST00000328713 983 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 MIR133A2-201ENST00000347538 102 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 RNU6-1331P-201ENST00000363658 106 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 RN7SKP28-201ENST00000364770 305 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 RN7SKP186-201ENST00000365371 303 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 RNU6-354P-201ENST00000383862 107 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 RNU6-468P-201ENST00000384003 109 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 RNU6-610P-201ENST00000384264 107 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 Z86062.1-201ENST00000406773 777 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC115285.1-201ENST00000424879 736 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 NDUFS5P5-201ENST00000437256 321 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 PCBP2P1-201ENST00000437262 977 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 STRADBP1-201ENST00000478954 1281 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 DUTP7-201ENST00000507982 486 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 HSD3BP3-201ENST00000514706 994 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 SCARNA6.1-201ENST00000516989 238 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC021678.3-201ENST00000517893 476 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AP003396.4-201ENST00000527574 265 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 TRIM51DP-201ENST00000529746 596 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 NOP56P3-201ENST00000549457 385 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 ARGFXP2-201ENST00000579304 949 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC124283.4-201ENST00000581815 456 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AL049840.6-201ENST00000604583 345 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 RPL12P48-201ENST00000605620 304 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AL157392.4-201ENST00000609756 345 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 MIR6793-201ENST00000612376 63 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AL356752.1-201ENST00000615844 593 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AC068620.4-201ENST00000636730 1182 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AP000550.3-201ENST00000637734 379 ntBASIC5.2□□□□□ -1.58
TNFRSF1BP20333 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TNFRSF1BP20333 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms