Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD28P10747 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.15□□□□□ -1.74
CD28P10747 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CD28P10747 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CD28P10747 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.15□□□□□ -1.74
CD28P10747 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CD28P10747 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CD28P10747 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.74
CD28P10747 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
CD28P10747 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CD28P10747 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CD28P10747 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.15□□□□□ -1.74
CD28P10747 AC112255.1-201ENST00000624070 2493 ntBASIC4.15□□□□□ -1.74
CD28P10747 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.15□□□□□ -1.74
CD28P10747 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CD28P10747 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.15□□□□□ -1.74
CD28P10747 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CD28P10747 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.15□□□□□ -1.74
CD28P10747 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.15□□□□□ -1.74
CD28P10747 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.15□□□□□ -1.74
CD28P10747 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD28P10747 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD28P10747 RNU4-4P-201ENST00000364588 130 ntBASIC4.15□□□□□ -1.75
CD28P10747 SNORA70.6-201ENST00000383934 134 ntBASIC4.15□□□□□ -1.75
CD28P10747 SNORD56.6-201ENST00000384569 71 ntBASIC4.15□□□□□ -1.75
CD28P10747 PEX12P1-201ENST00000400284 1048 ntBASIC4.15□□□□□ -1.75
CD28P10747 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.15□□□□□ -1.75
CD28P10747 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CD28P10747 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.15□□□□□ -1.75
CD28P10747 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.15□□□□□ -1.75
CD28P10747 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.15□□□□□ -1.75
CD28P10747 RPS27AP6-201ENST00000427962 448 ntBASIC4.15□□□□□ -1.75
CD28P10747 RBMY2QP-201ENST00000429799 1147 ntBASIC4.15□□□□□ -1.75
CD28P10747 NPM1P48-201ENST00000436002 853 ntBASIC4.15□□□□□ -1.75
CD28P10747 MTND2P40-201ENST00000436718 841 ntBASIC4.15□□□□□ -1.75
CD28P10747 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.15□□□□□ -1.75
CD28P10747 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.15□□□□□ -1.75
CD28P10747 Z92846.1-201ENST00000456203 268 ntBASIC4.15□□□□□ -1.75
CD28P10747 RN7SL188P-201ENST00000469842 285 ntBASIC4.15□□□□□ -1.75
CD28P10747 AC090114.3-201ENST00000479267 829 ntBASIC4.15□□□□□ -1.75
CD28P10747 AC112184.1-201ENST00000505179 312 ntBASIC4.15□□□□□ -1.75
CD28P10747 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.15□□□□□ -1.75
CD28P10747 AP000676.2-201ENST00000529711 301 ntBASIC4.15□□□□□ -1.75
CD28P10747 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.15□□□□□ -1.75
CD28P10747 AC024940.3-201ENST00000538551 316 ntBASIC4.15□□□□□ -1.75
CD28P10747 AC092490.3-201ENST00000545370 572 ntBASIC4.15□□□□□ -1.75
CD28P10747 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.15□□□□□ -1.75
CD28P10747 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.15□□□□□ -1.75
CD28P10747 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.15□□□□□ -1.75
CD28P10747 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.15□□□□□ -1.75
CD28P10747 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.15□□□□□ -1.75
CD28P10747 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.15□□□□□ -1.75
CD28P10747 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.15□□□□□ -1.75
CD28P10747 AL022394.1-201ENST00000606979 292 ntBASIC4.15□□□□□ -1.75
CD28P10747 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.15□□□□□ -1.75
CD28P10747 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD28P10747 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CD28P10747 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD28P10747 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD28P10747 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD28P10747 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD28P10747 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD28P10747 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.15□□□□□ -1.75
CD28P10747 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CD28P10747 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.15□□□□□ -1.75
CD28P10747 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.15□□□□□ -1.75
CD28P10747 AC109446.4-201ENST00000623235 2755 ntBASIC4.14□□□□□ -1.75
CD28P10747 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
CD28P10747 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.14□□□□□ -1.75
CD28P10747 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CD28P10747 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.14□□□□□ -1.75
CD28P10747 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CD28P10747 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CD28P10747 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CD28P10747 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.14□□□□□ -1.75
CD28P10747 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CD28P10747 MIR600-201ENST00000385007 98 ntBASIC4.14□□□□□ -1.75
CD28P10747 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.14□□□□□ -1.75
CD28P10747 AL139128.1-201ENST00000413921 941 ntBASIC4.14□□□□□ -1.75
CD28P10747 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.14□□□□□ -1.75
CD28P10747 PA2G4P6-201ENST00000438325 1197 ntBASIC4.14□□□□□ -1.75
CD28P10747 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.14□□□□□ -1.75
CD28P10747 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.14□□□□□ -1.75
CD28P10747 AC023271.1-201ENST00000445936 1090 ntBASIC4.14□□□□□ -1.75
CD28P10747 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.14□□□□□ -1.75
CD28P10747 snoU13.20-201ENST00000459180 104 ntBASIC4.14□□□□□ -1.75
CD28P10747 SNORD125-201ENST00000459538 96 ntBASIC4.14□□□□□ -1.75
CD28P10747 AC135999.1-201ENST00000478962 479 ntBASIC4.14□□□□□ -1.75
CD28P10747 AC058823.1-201ENST00000485315 474 ntBASIC4.14□□□□□ -1.75
CD28P10747 RN7SL423P-201ENST00000486202 304 ntBASIC4.14□□□□□ -1.75
CD28P10747 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.14□□□□□ -1.75
CD28P10747 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.14□□□□□ -1.75
CD28P10747 RN7SKP147-201ENST00000517154 244 ntBASIC4.14□□□□□ -1.75
CD28P10747 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.14□□□□□ -1.75
CD28P10747 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.14□□□□□ -1.75
CD28P10747 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.14□□□□□ -1.75
CD28P10747 AC013701.1-201ENST00000522657 465 ntBASIC4.14□□□□□ -1.75
CD28P10747 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.14□□□□□ -1.75
CD28P10747 OR8G3P-201ENST00000533406 921 ntBASIC4.14□□□□□ -1.75
CD28P10747 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms