Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.73□□□□□ -1.49
TPM1P09493 AC013429.2-201ENST00000418798 781 ntBASIC5.73□□□□□ -1.49
TPM1P09493 RPL34P3-201ENST00000421454 338 ntBASIC5.73□□□□□ -1.49
TPM1P09493 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.73□□□□□ -1.49
TPM1P09493 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.73□□□□□ -1.49
TPM1P09493 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 MRPL35P2-201ENST00000448009 511 ntBASIC5.73□□□□□ -1.49
TPM1P09493 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.73□□□□□ -1.49
TPM1P09493 AC011476.1-201ENST00000466725 307 ntBASIC5.73□□□□□ -1.49
TPM1P09493 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
TPM1P09493 AC058823.1-201ENST00000485315 474 ntBASIC5.73□□□□□ -1.49
TPM1P09493 EIF4E2P2-201ENST00000492033 736 ntBASIC5.73□□□□□ -1.49
TPM1P09493 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.73□□□□□ -1.49
TPM1P09493 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.73□□□□□ -1.49
TPM1P09493 AC090022.1-201ENST00000546569 311 ntBASIC5.73□□□□□ -1.49
TPM1P09493 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.73□□□□□ -1.49
TPM1P09493 FO681491.1-202ENST00000623392 737 ntBASIC5.73□□□□□ -1.49
TPM1P09493 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 MIR193BHG-214ENST00000641765 509 ntBASIC5.73□□□□□ -1.49
TPM1P09493 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.73□□□□□ -1.49
TPM1P09493 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TPM1P09493 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM1P09493 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.72□□□□□ -1.49
TPM1P09493 AC107068.1-201ENST00000563286 4218 ntBASIC5.72□□□□□ -1.49
TPM1P09493 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TPM1P09493 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TPM1P09493 OR8V1P-201ENST00000395193 873 ntBASIC5.72□□□□□ -1.49
TPM1P09493 AL390316.1-201ENST00000406279 553 ntBASIC5.72□□□□□ -1.49
TPM1P09493 AL662874.1-201ENST00000426065 230 ntBASIC5.72□□□□□ -1.49
TPM1P09493 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.72□□□□□ -1.49
TPM1P09493 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.72□□□□□ -1.49
TPM1P09493 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.72□□□□□ -1.49
TPM1P09493 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM1P09493 AC006427.1-201ENST00000514359 712 ntBASIC5.72□□□□□ -1.49
TPM1P09493 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM1P09493 RN7SKP5-201ENST00000517045 272 ntBASIC5.72□□□□□ -1.49
TPM1P09493 CYCSP22-201ENST00000517555 339 ntBASIC5.72□□□□□ -1.49
TPM1P09493 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.72□□□□□ -1.49
TPM1P09493 YWHABP2-201ENST00000540201 713 ntBASIC5.72□□□□□ -1.49
TPM1P09493 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.72□□□□□ -1.49
TPM1P09493 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.72□□□□□ -1.49
TPM1P09493 ARGFXP2-201ENST00000579304 949 ntBASIC5.72□□□□□ -1.49
TPM1P09493 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.72□□□□□ -1.49
TPM1P09493 AC132068.1-201ENST00000623805 459 ntBASIC5.72□□□□□ -1.49
TPM1P09493 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM1P09493 AC129915.3-201ENST00000634128 948 ntBASIC5.72□□□□□ -1.49
TPM1P09493 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.72□□□□□ -1.49
TPM1P09493 LINC01355-201ENST00000566551 5444 ntBASIC5.72□□□□□ -1.49
TPM1P09493 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.72□□□□□ -1.49
TPM1P09493 MAPK10-349ENST00000641767 3661 ntBASIC5.72□□□□□ -1.49
TPM1P09493 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TPM1P09493 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM1P09493 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TPM1P09493 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TPM1P09493 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.71□□□□□ -1.49
TPM1P09493 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
TPM1P09493 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
TPM1P09493 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TPM1P09493 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.71□□□□□ -1.5
TPM1P09493 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.71□□□□□ -1.5
TPM1P09493 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TPM1P09493 OR52B3P-201ENST00000314715 928 ntBASIC5.71□□□□□ -1.5
TPM1P09493 SNORA16A-201ENST00000384342 137 ntBASIC5.71□□□□□ -1.5
TPM1P09493 MIR105-1-201ENST00000385222 81 ntBASIC5.71□□□□□ -1.5
TPM1P09493 AL035079.1-201ENST00000405210 287 ntBASIC5.71□□□□□ -1.5
TPM1P09493 AC066692.1-201ENST00000421721 457 ntBASIC5.71□□□□□ -1.5
TPM1P09493 CLNS1AP1-201ENST00000435954 682 ntBASIC5.71□□□□□ -1.5
TPM1P09493 AC110602.1-201ENST00000437414 318 ntBASIC5.71□□□□□ -1.5
TPM1P09493 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.71□□□□□ -1.5
TPM1P09493 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.71□□□□□ -1.5
TPM1P09493 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.71□□□□□ -1.5
TPM1P09493 AC091180.1-201ENST00000462104 372 ntBASIC5.71□□□□□ -1.5
TPM1P09493 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.71□□□□□ -1.5
TPM1P09493 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TPM1P09493 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.71□□□□□ -1.5
TPM1P09493 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.71□□□□□ -1.5
TPM1P09493 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.71□□□□□ -1.5
TPM1P09493 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.71□□□□□ -1.5
TPM1P09493 MIR8069-1-201ENST00000616627 86 ntBASIC5.71□□□□□ -1.5
TPM1P09493 MIR8069-2-201ENST00000621412 86 ntBASIC5.71□□□□□ -1.5
TPM1P09493 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.71□□□□□ -1.5
TPM1P09493 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms