Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HTR1AP08908 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HTR1AP08908 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HTR1AP08908 RNU1-146P-201ENST00000364015 165 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 RNU2-22P-201ENST00000411266 212 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.66□□□□□ -1.66
HTR1AP08908 AC066692.1-201ENST00000421721 457 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.66□□□□□ -1.66
HTR1AP08908 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.66□□□□□ -1.66
HTR1AP08908 AP000942.1-201ENST00000463969 747 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 AC011476.1-201ENST00000466725 307 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HTR1AP08908 AP002884.1-201ENST00000479691 655 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.66□□□□□ -1.66
HTR1AP08908 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.66□□□□□ -1.66
HTR1AP08908 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.66□□□□□ -1.66
HTR1AP08908 RNA5SP271-201ENST00000516700 88 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 RN7SKP183-201ENST00000517169 324 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HTR1AP08908 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.66□□□□□ -1.66
HTR1AP08908 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.66□□□□□ -1.66
HTR1AP08908 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.66□□□□□ -1.66
HTR1AP08908 AC116553.2-201ENST00000564203 463 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 AC118658.2-201ENST00000618697 459 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HTR1AP08908 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
HTR1AP08908 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HTR1AP08908 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HTR1AP08908 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HTR1AP08908 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HTR1AP08908 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
HTR1AP08908 PANDAR-201ENST00000629595 1506 ntBASIC4.66□□□□□ -1.66
HTR1AP08908 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HTR1AP08908 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HTR1AP08908 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HTR1AP08908 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HTR1AP08908 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.65□□□□□ -1.66
HTR1AP08908 AL672167.1-203ENST00000641299 2975 ntBASIC4.65□□□□□ -1.66
HTR1AP08908 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HTR1AP08908 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HTR1AP08908 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
HTR1AP08908 UGT2B26P-201ENST00000508672 1613 ntBASIC4.65□□□□□ -1.66
HTR1AP08908 OR51C1P-202ENST00000641159 1444 ntBASIC4.65□□□□□ -1.66
HTR1AP08908 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HTR1AP08908 OR52B3P-201ENST00000314715 928 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.65□□□□□ -1.67
HTR1AP08908 RN7SKP292-201ENST00000365522 317 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.65□□□□□ -1.67
HTR1AP08908 OR4K12P-201ENST00000406538 961 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 Z93019.1-201ENST00000416450 973 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 AL662874.1-201ENST00000426065 230 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.65□□□□□ -1.67
HTR1AP08908 AL161722.2-201ENST00000434731 981 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 CLNS1AP1-201ENST00000435954 682 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.65□□□□□ -1.67
HTR1AP08908 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.65□□□□□ -1.67
HTR1AP08908 Z84478.1-201ENST00000438230 1219 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.65□□□□□ -1.67
HTR1AP08908 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.65□□□□□ -1.67
HTR1AP08908 AL445665.1-202ENST00000452436 324 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 HLA-DPA3-207ENST00000454398 229 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 GYG1P1-201ENST00000460864 698 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 DEFB109F-201ENST00000491870 277 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 NRBF2P4-201ENST00000520874 850 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.65□□□□□ -1.67
HTR1AP08908 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.65□□□□□ -1.67
HTR1AP08908 TRIM77BP-201ENST00000524985 1119 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 AP000859.1-201ENST00000525536 307 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.65□□□□□ -1.67
HTR1AP08908 AC078878.1-201ENST00000539832 958 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.65□□□□□ -1.67
HTR1AP08908 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HTR1AP08908 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HTR1AP08908 AC060766.1-201ENST00000590824 627 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.65□□□□□ -1.67
HTR1AP08908 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.65□□□□□ -1.67
HTR1AP08908 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HTR1AP08908 MIR193BHG-214ENST00000641765 509 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HTR1AP08908 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.65□□□□□ -1.67
HTR1AP08908 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.65□□□□□ -1.67
HTR1AP08908 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HTR1AP08908 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.65□□□□□ -1.67
HTR1AP08908 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HTR1AP08908 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HTR1AP08908 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HTR1AP08908 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.65□□□□□ -1.67
HTR1AP08908 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HTR1AP08908 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HTR1AP08908 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HTR1AP08908 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HTR1AP08908 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HTR1AP08908 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HTR1AP08908 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.64□□□□□ -1.67
HTR1AP08908 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
HTR1AP08908 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HTR1AP08908 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HTR1AP08908 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms