Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
MMP3P08254 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.93□□□□□ -1.46
MMP3P08254 AC092747.4-201ENST00000620519 1861 ntBASIC5.93□□□□□ -1.46
MMP3P08254 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MMP3P08254 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MMP3P08254 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MMP3P08254 AC006206.1-201ENST00000544842 3387 ntBASIC5.93□□□□□ -1.46
MMP3P08254 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
MMP3P08254 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.93□□□□□ -1.46
MMP3P08254 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.93□□□□□ -1.46
MMP3P08254 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.92□□□□□ -1.46
MMP3P08254 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
MMP3P08254 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
MMP3P08254 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
MMP3P08254 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.92□□□□□ -1.46
MMP3P08254 Z80107.2-201ENST00000445127 392 ntBASIC5.92□□□□□ -1.46
MMP3P08254 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.92□□□□□ -1.46
MMP3P08254 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.92□□□□□ -1.46
MMP3P08254 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.92□□□□□ -1.46
MMP3P08254 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.92□□□□□ -1.46
MMP3P08254 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.92□□□□□ -1.46
MMP3P08254 OR4R2P-201ENST00000530815 597 ntBASIC5.92□□□□□ -1.46
MMP3P08254 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.92□□□□□ -1.46
MMP3P08254 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.92□□□□□ -1.46
MMP3P08254 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.92□□□□□ -1.46
MMP3P08254 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.92□□□□□ -1.46
MMP3P08254 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.92□□□□□ -1.46
MMP3P08254 AC009597.2-201ENST00000604659 592 ntBASIC5.92□□□□□ -1.46
MMP3P08254 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.92□□□□□ -1.46
MMP3P08254 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.92□□□□□ -1.46
MMP3P08254 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
MMP3P08254 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.92□□□□□ -1.46
MMP3P08254 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.92□□□□□ -1.46
MMP3P08254 OR4G1P-202ENST00000641173 1788 ntBASIC5.92□□□□□ -1.46
MMP3P08254 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
MMP3P08254 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
MMP3P08254 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MMP3P08254 THAP12P8-201ENST00000447914 2115 ntBASIC5.92□□□□□ -1.46
MMP3P08254 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
MMP3P08254 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.91□□□□□ -1.46
MMP3P08254 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.91□□□□□ -1.46
MMP3P08254 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.91□□□□□ -1.46
MMP3P08254 AC083899.1-201ENST00000454465 3819 ntBASIC5.91□□□□□ -1.46
MMP3P08254 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
MMP3P08254 AC140479.2-201ENST00000421567 3130 ntBASIC5.91□□□□□ -1.46
MMP3P08254 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MMP3P08254 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MMP3P08254 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
MMP3P08254 U3.3-201ENST00000362986 216 ntBASIC5.91□□□□□ -1.46
MMP3P08254 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MMP3P08254 MIR600-201ENST00000385007 98 ntBASIC5.91□□□□□ -1.46
MMP3P08254 AL139039.2-201ENST00000407436 479 ntBASIC5.91□□□□□ -1.46
MMP3P08254 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.91□□□□□ -1.46
MMP3P08254 EI24P4-201ENST00000423683 1078 ntBASIC5.91□□□□□ -1.46
MMP3P08254 FABP7P2-201ENST00000429946 379 ntBASIC5.91□□□□□ -1.46
MMP3P08254 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.91□□□□□ -1.46
MMP3P08254 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.91□□□□□ -1.46
MMP3P08254 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.91□□□□□ -1.46
MMP3P08254 RPL31P53-201ENST00000457065 348 ntBASIC5.91□□□□□ -1.46
MMP3P08254 AC108161.1-201ENST00000461060 402 ntBASIC5.91□□□□□ -1.46
MMP3P08254 PPP1R11P1-201ENST00000486095 376 ntBASIC5.91□□□□□ -1.46
MMP3P08254 OR2A3P-201ENST00000493774 953 ntBASIC5.91□□□□□ -1.46
MMP3P08254 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.91□□□□□ -1.46
MMP3P08254 RNA5SP228-201ENST00000516232 133 ntBASIC5.91□□□□□ -1.46
MMP3P08254 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.91□□□□□ -1.46
MMP3P08254 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.91□□□□□ -1.46
MMP3P08254 AC092451.2-201ENST00000538746 658 ntBASIC5.91□□□□□ -1.46
MMP3P08254 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.91□□□□□ -1.46
MMP3P08254 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.91□□□□□ -1.46
MMP3P08254 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.91□□□□□ -1.46
MMP3P08254 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.91□□□□□ -1.46
MMP3P08254 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.91□□□□□ -1.46
MMP3P08254 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.91□□□□□ -1.46
MMP3P08254 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MMP3P08254 BNIP3P39-201ENST00000601077 554 ntBASIC5.91□□□□□ -1.46
MMP3P08254 AC104785.1-201ENST00000603220 588 ntBASIC5.91□□□□□ -1.46
MMP3P08254 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.91□□□□□ -1.46
MMP3P08254 FAM25E-202ENST00000608562 189 ntBASIC5.91□□□□□ -1.46
MMP3P08254 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.91□□□□□ -1.46
MMP3P08254 AC093799.2-201ENST00000610062 578 ntBASIC5.91□□□□□ -1.46
MMP3P08254 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.91□□□□□ -1.46
MMP3P08254 AL353662.3-201ENST00000625131 237 ntBASIC5.91□□□□□ -1.46
MMP3P08254 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MMP3P08254 AL034549.2-201ENST00000618285 3373 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms