Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RBM22P1-201ENST00000578589 1214 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 BNIP3P32-201ENST00000600015 554 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AF230666.2-201ENST00000602328 725 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC126915.2-201ENST00000610957 190 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 RPSAP73-201ENST00000614820 330 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC095038.2-201ENST00000621464 1070 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 DDX6P1-205ENST00000441966 1436 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC005225.5-201ENST00000623547 2225 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC068870.1-201ENST00000563737 2455 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 HSPD1P7-201ENST00000447985 1686 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-DOAP06340 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-DOAP06340 RN7SKP74-201ENST00000362849 309 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 RNA5SP507-201ENST00000363603 121 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-DOAP06340 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 OR10T1P-201ENST00000424327 947 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 ELOCP13-201ENST00000443934 329 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 RN7SL222P-201ENST00000476452 299 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 RN7SKP5-201ENST00000517045 272 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC122688.1-201ENST00000541494 223 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 CKS1BP1-201ENST00000555221 240 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC103968.1-201ENST00000557841 573 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC060780.2-201ENST00000589047 198 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 PCA3_2.1-201ENST00000612507 409 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 AP000943.4-201ENST00000622912 357 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 AP002505.2-201ENST00000623585 696 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 AL078595.3-201ENST00000623815 1166 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC019226.2-201ENST00000625973 424 ntBASIC6.48□□□□□ -1.37
HLA-DOAP06340 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DOAP06340 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DOAP06340 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DOAP06340 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DOAP06340 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 SNORA58B-201ENST00000364259 136 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 SNORA16A-201ENST00000384342 137 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 RNU1-149P-201ENST00000390870 161 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 RN7SKP273-201ENST00000411392 314 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 RPSAP35-201ENST00000413753 818 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC007394.1-201ENST00000421941 531 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC017019.1-201ENST00000426129 261 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 RPL12P17-201ENST00000432393 498 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 GAPDHP58-201ENST00000438477 1006 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 RRM2P4-201ENST00000441721 562 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC078857.1-201ENST00000469870 667 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 OR9N1P-201ENST00000491296 333 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 PRELID3BP6-201ENST00000503839 571 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC147055.3-201ENST00000510547 851 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC034205.1-201ENST00000520621 638 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 OR7E13P-201ENST00000526052 910 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC022832.1-201ENST00000530718 645 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC027176.2-201ENST00000559166 746 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms