Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
TIMP1P01033 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TIMP1P01033 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.64□□□□□ -1.51
TIMP1P01033 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TIMP1P01033 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.63□□□□□ -1.51
TIMP1P01033 HSPD1P8-201ENST00000400121 1658 ntBASIC5.63□□□□□ -1.51
TIMP1P01033 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.63□□□□□ -1.51
TIMP1P01033 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.63□□□□□ -1.51
TIMP1P01033 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.63□□□□□ -1.51
TIMP1P01033 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.63□□□□□ -1.51
TIMP1P01033 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.63□□□□□ -1.51
TIMP1P01033 MTCYBP21-201ENST00000443300 1113 ntBASIC5.63□□□□□ -1.51
TIMP1P01033 AL356390.1-201ENST00000455684 397 ntBASIC5.63□□□□□ -1.51
TIMP1P01033 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.63□□□□□ -1.51
TIMP1P01033 LDHBP3-201ENST00000514909 822 ntBASIC5.63□□□□□ -1.51
TIMP1P01033 SCARNA20.4-201ENST00000516969 131 ntBASIC5.63□□□□□ -1.51
TIMP1P01033 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.63□□□□□ -1.51
TIMP1P01033 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TIMP1P01033 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.63□□□□□ -1.51
TIMP1P01033 AL512782.1-201ENST00000603093 364 ntBASIC5.63□□□□□ -1.51
TIMP1P01033 AC008814.1-201ENST00000603797 406 ntBASIC5.63□□□□□ -1.51
TIMP1P01033 AC244107.2-201ENST00000611773 76 ntBASIC5.63□□□□□ -1.51
TIMP1P01033 MTCO1P1-201ENST00000624263 1081 ntBASIC5.63□□□□□ -1.51
TIMP1P01033 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.63□□□□□ -1.51
TIMP1P01033 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.63□□□□□ -1.51
TIMP1P01033 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
TIMP1P01033 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TIMP1P01033 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 AC092070.2-203ENST00000598377 3644 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
TIMP1P01033 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.62□□□□□ -1.51
TIMP1P01033 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.62□□□□□ -1.51
TIMP1P01033 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TIMP1P01033 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.62□□□□□ -1.51
TIMP1P01033 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TIMP1P01033 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TIMP1P01033 RNA5SP191-201ENST00000362585 102 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 RNA5SP251-201ENST00000410614 137 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.62□□□□□ -1.51
TIMP1P01033 AL161722.2-201ENST00000434731 981 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.62□□□□□ -1.51
TIMP1P01033 RPL10P17-201ENST00000453852 316 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TIMP1P01033 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.62□□□□□ -1.51
TIMP1P01033 AC006427.1-201ENST00000514359 712 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.62□□□□□ -1.51
TIMP1P01033 RNA5SP116-201ENST00000516132 98 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.62□□□□□ -1.51
TIMP1P01033 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.62□□□□□ -1.51
TIMP1P01033 AL034374.2-201ENST00000605281 548 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.62□□□□□ -1.51
TIMP1P01033 uc_338.7-201ENST00000621834 124 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TIMP1P01033 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TIMP1P01033 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.62□□□□□ -1.51
TIMP1P01033 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.62□□□□□ -1.51
TIMP1P01033 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.62□□□□□ -1.51
TIMP1P01033 AC073365.1-203ENST00000641055 1992 ntBASIC5.62□□□□□ -1.51
TIMP1P01033 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TIMP1P01033 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TIMP1P01033 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TIMP1P01033 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.61□□□□□ -1.51
TIMP1P01033 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TIMP1P01033 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
TIMP1P01033 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TIMP1P01033 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TIMP1P01033 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TIMP1P01033 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TIMP1P01033 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TIMP1P01033 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TIMP1P01033 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.61□□□□□ -1.51
TIMP1P01033 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TIMP1P01033 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TIMP1P01033 RN7SKP100-201ENST00000411258 284 ntBASIC5.61□□□□□ -1.51
TIMP1P01033 AC004074.1-201ENST00000421810 1063 ntBASIC5.61□□□□□ -1.51
TIMP1P01033 KATNBL1P2-201ENST00000433311 835 ntBASIC5.61□□□□□ -1.51
TIMP1P01033 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms