Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC093875.1-201ENST00000623688 504 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 AC068620.4-201ENST00000636730 1182 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
TRIM38O00635 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM38O00635 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM38O00635 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM38O00635 AL161912.4-201ENST00000623889 2468 ntBASIC5.9□□□□□ -1.47
TRIM38O00635 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.9□□□□□ -1.47
TRIM38O00635 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM38O00635 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM38O00635 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM38O00635 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM38O00635 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM38O00635 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.47
TRIM38O00635 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM38O00635 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM38O00635 ZNF733P-202ENST00000444809 1573 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TRIM38O00635 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 AC012254.3-201ENST00000591183 2117 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TRIM38O00635 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM38O00635 SMG1P7-201ENST00000565246 2704 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
TRIM38O00635 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM38O00635 RNA5SP453-201ENST00000362503 119 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM38O00635 HMGB3P7-201ENST00000400214 611 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM38O00635 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM38O00635 RPS27P5-201ENST00000444247 244 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM38O00635 AL162739.1-201ENST00000450606 307 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 AC016027.4-201ENST00000450866 277 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 HMGB1P5-202ENST00000451497 985 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 ATP5G1P3-201ENST00000463301 410 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM38O00635 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 RN7SL629P-201ENST00000489622 285 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM38O00635 TOMM22P4-201ENST00000511318 336 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.89□□□□□ -1.47
TRIM38O00635 snoU109.5-201ENST00000516231 132 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
TRIM38O00635 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM38O00635 OR8X1P-201ENST00000534542 869 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM38O00635 AC006530.1-201ENST00000555980 571 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 AL356801.1-201ENST00000559320 294 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 AC104229.1-201ENST00000561364 255 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 EIF1P5-201ENST00000585002 234 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 AL391834.2-201ENST00000609982 546 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM38O00635 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 AC090772.4-201ENST00000623599 362 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 AC120349.3-201ENST00000624377 529 ntBASIC5.89□□□□□ -1.47
TRIM38O00635 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM38O00635 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TRIM38O00635 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
TRIM38O00635 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM38O00635 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM38O00635 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM38O00635 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM38O00635 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TRIM38O00635 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TRIM38O00635 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM38O00635 CR788268.1-201ENST00000603931 1809 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM38O00635 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TRIM38O00635 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM38O00635 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 U3.10-201ENST00000364459 214 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 RNU105B-201ENST00000364478 208 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM38O00635 RNU4-31P-201ENST00000384211 141 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 RNU6-1257P-201ENST00000384625 110 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 SNRPEP6-201ENST00000407465 277 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM38O00635 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM38O00635 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM38O00635 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 RPS15AP30-201ENST00000420976 390 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM38O00635 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms