Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 MAST4-IT1-201ENST00000514241 658 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC087752.2-201ENST00000521219 281 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AP006587.5-201ENST00000532033 739 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 POLR2KP1-201ENST00000553226 168 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 NDUFA3P4-201ENST00000560814 250 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 MIR548Y-201ENST00000582739 110 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC011497.2-201ENST00000600255 639 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AP001554.1-201ENST00000604533 376 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AP000894.4-201ENST00000610185 483 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AL445647.2-201ENST00000615170 130 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AL354718.1-201ENST00000619764 589 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC092650.2-201ENST00000619984 902 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC114546.4-201ENST00000624413 369 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 UG0898H09-202ENST00000623646 7040 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 DBF4P1-201ENST00000412976 1892 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC245100.2-201ENST00000454544 1679 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC007996.1-201ENST00000620414 2821 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC073365.1-203ENST00000641055 1992 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC012078.1-201ENST00000405035 1646 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 RNU1-21P-201ENST00000363327 163 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AL451142.1-201ENST00000375867 775 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 CST13P-201ENST00000376992 428 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AMELY-202ENST00000383036 621 ntTSL 5 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AL050335.1-201ENST00000396909 869 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 RNU6-248P-201ENST00000410720 107 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AIMP1P1-201ENST00000418670 937 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AL450263.2-201ENST00000439400 589 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AL831737.1-201ENST00000441288 271 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 LARP1BP2-201ENST00000486594 519 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC109462.1-201ENST00000491087 368 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC107956.2-201ENST00000496042 454 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 RN7SL775P-201ENST00000498361 336 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 MTND6P8-201ENST00000503471 522 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC011352.3-201ENST00000505162 593 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC021220.1-201ENST00000507445 630 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 RPL37-205ENST00000509877 637 ntTSL 5 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC010342.1-201ENST00000514047 877 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 SNORA20.3-201ENST00000516880 132 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 RNA5SP135-201ENST00000517019 125 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC109635.6-201ENST00000525487 1113 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 MIR5192-201ENST00000579892 92 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 SNORD39.2-201ENST00000579995 76 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC005730.3-201ENST00000583067 366 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 RPSAP66-201ENST00000592196 606 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AL390208.1-201ENST00000605885 644 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 AC092954.2-201ENST00000609103 430 ntBASIC6.04□□□□□ -1.44
SHISA3A0PJX4 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms