Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AL049539.1-201ENST00000611964 459 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AC112694.2-201ENST00000623697 768 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 MIPEPP2-201ENST00000422560 1819 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 RN7SKP95-201ENST00000362860 303 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 SNORA66-201ENST00000384792 133 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 SMC4P1-201ENST00000414479 527 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 NMNAT1P1-201ENST00000554095 876 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC007066.2-202ENST00000566531 914 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC011487.3-201ENST00000593607 453 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 MEMO1P5-201ENST00000604810 406 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AL137246.1-201ENST00000607072 977 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC073575.2-201ENST00000614212 627 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 AC020763.5-201ENST00000623298 430 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMIM28A0A1B0GU29 Z95114.1-201ENST00000624264 14574 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 CASC19-221ENST00000641309 1382 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 AC103591.2-201ENST00000265259 766 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 SNORA2.3-201ENST00000383920 135 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 AL390316.1-201ENST00000406279 553 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 RPS21P8-201ENST00000413365 247 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 RPL31P44-201ENST00000447680 377 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 AC140172.1-201ENST00000502928 141 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 AC010350.1-201ENST00000504908 231 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 AP003080.1-202ENST00000526526 915 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 BRD9P1-201ENST00000529855 560 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 MIR3934-201ENST00000579806 107 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 AC004656.1-201ENST00000568479 4951 ntBASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMIM28A0A1B0GU29 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms