Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RPL7P50-201ENST00000600588 727 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AP001823.1-201ENST00000604056 1003 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL136139.1-201ENST00000605568 222 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AP005432.2-201ENST00000608162 586 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL158062.1-201ENST00000619632 745 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 HSPD1P11-201ENST00000508643 1702 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 USP8-204ENST00000425032 3559 ntTSL 2 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC107021.2-201ENST00000567714 2095 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 RNA5SP140-201ENST00000364524 92 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 SNORA62.2-201ENST00000364672 152 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 RNU1-89P-201ENST00000384592 164 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC133644.1-201ENST00000398171 937 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AL583835.2-203ENST00000407271 440 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 U3.35-201ENST00000408405 208 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 RPS6P23-201ENST00000413224 722 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 RBMY2JP-201ENST00000425544 1059 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AL365396.1-201ENST00000430854 671 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC004938.1-201ENST00000438468 308 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 TRIM60P16-201ENST00000444048 694 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC022431.1-201ENST00000450941 438 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 ATP5G1P6-201ENST00000451206 412 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 RPL5P32-201ENST00000454085 879 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 HMGB1P4-201ENST00000455362 567 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AL133244.1-201ENST00000456007 258 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 SRP68P2-201ENST00000456184 254 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 RN7SL815P-201ENST00000470970 290 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 LINC02082-201ENST00000484765 710 ntTSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC090013.1-201ENST00000485147 480 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC073610.1-201ENST00000489971 396 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 TRIM77BP-201ENST00000524985 1119 ntBASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01558Q9Y6Z2 RBM22P12-201ENST00000567098 1255 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms