Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 MIR132-201ENST00000591554 101 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC024023.1-201ENST00000624530 922 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC017104.5-201ENST00000637647 639 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 MTCO1P18-201ENST00000455518 1419 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AP000547.3-204ENST00000588548 2523 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AL121768.1-201ENST00000613917 2544 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC022325.1-201ENST00000502748 2199 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 CASC19-281ENST00000642118 1554 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 OR52B3P-201ENST00000314715 928 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 SNORA21-201ENST00000362423 132 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 RNA5SP375-201ENST00000362975 119 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 RNU4-7P-201ENST00000364758 141 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 MT-TP-201ENST00000387461 68 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC233289.1-201ENST00000403700 508 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 RPL22P18-201ENST00000417197 377 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 RPL35AP31-201ENST00000418340 337 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC023128.2-201ENST00000420880 1223 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 BRWD1P3-201ENST00000428816 390 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 LDHAP2-201ENST00000437325 985 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AL512593.1-201ENST00000444758 779 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 SEPT14P24-201ENST00000447236 180 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC079203.1-201ENST00000487972 404 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC134050.1-201ENST00000495088 933 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC113420.1-201ENST00000507903 571 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC021106.1-201ENST00000509020 1058 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC093752.1-206ENST00000511823 336 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 MTATP6P15-201ENST00000527233 835 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AP003396.4-201ENST00000527574 265 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC092121.1-201ENST00000569452 202 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC008536.1-201ENST00000602872 669 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 DUXAP3-201ENST00000603616 594 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC009237.12-201ENST00000604755 742 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 FAM72A-208ENST00000607379 1139 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 MIR6826-201ENST00000617808 98 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 AC010435.1-201ENST00000623353 1177 ntBASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB1Q9Y5F3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AL355377.1-201ENST00000621125 1653 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms