Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.64□□□□□ -1.03
HPS5Q9UPZ3 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.64□□□□□ -1.03
HPS5Q9UPZ3 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 RNU5F-6P-201ENST00000362979 116 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 Y_RNA.315-201ENST00000365117 102 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 Y_RNA.452-201ENST00000384202 108 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AL122016.1-201ENST00000403365 367 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AL136100.1-201ENST00000407696 330 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 RNU2-62P-201ENST00000410868 191 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AL355862.1-201ENST00000412705 353 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 SNRPEP10-201ENST00000420249 274 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 SETP9-201ENST00000423837 832 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 RPL5P34-201ENST00000426545 891 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC236972.2-201ENST00000434979 310 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 FUNDC2P2-202ENST00000443452 493 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 GAPDHP17-201ENST00000449858 1001 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC234771.3-201ENST00000454984 622 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 CEACAMP4-201ENST00000457676 421 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 RPS20P20-201ENST00000460498 340 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC009567.2-201ENST00000502989 349 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC114981.1-201ENST00000503897 678 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC098799.3-201ENST00000506095 438 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AF131216.2-201ENST00000512316 564 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 SNORA81.2-201ENST00000516868 170 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 OR5M7P-201ENST00000526140 972 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 OSBPL9P2-201ENST00000526582 1228 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 COX6CP5-201ENST00000527162 228 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 DERA-209ENST00000532964 854 ntTSL 5 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC243972.3-201ENST00000539655 198 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 PRR13P5-201ENST00000596581 442 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 SNRPGP17-201ENST00000603780 214 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AL591926.1-201ENST00000620542 217 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 MIR6806-201ENST00000622141 64 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 AC138393.1-206ENST00000540997 1886 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 FLJ42393-201ENST00000623801 2270 ntBASIC8.63□□□□□ -1.03
HPS5Q9UPZ3 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 MTND4P35-201ENST00000604257 1375 ntBASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 RPL11P4-201ENST00000332269 436 ntBASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 RNU6-1085P-201ENST00000363576 107 ntBASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 SNORD94-201ENST00000386037 137 ntBASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 MT-TG-201ENST00000387429 68 ntBASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HPS5Q9UPZ3 HMGB3P20-201ENST00000417997 600 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms