Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 BGLT3-201ENST00000564523 994 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 MSL3P1-202ENST00000440028 1468 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 AC012339.2-201ENST00000523996 453 ntBASIC6.5□□□□□ -1.37
SCN11AQ9UI33 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 AC068831.8-201ENST00000620171 435 ntBASIC6.5□□□□□ -1.37
SCN11AQ9UI33 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
SCN11AQ9UI33 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 RNA5SP191-201ENST00000362585 102 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 RN7SL197P-201ENST00000466981 299 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AC022133.1-201ENST00000490961 571 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AP001880.2-201ENST00000538233 448 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AC010435.1-201ENST00000623353 1177 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AC034229.2-201ENST00000566945 2508 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AL132640.2-201ENST00000559968 1698 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 ECM1P2-201ENST00000503354 1577 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 RNU1-32P-201ENST00000363937 159 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 RNU6-398P-201ENST00000384143 109 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 U3.32-201ENST00000408116 212 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 RN7SKP16-201ENST00000410180 299 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 HMGB1P4-201ENST00000455362 567 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AC027369.5-201ENST00000533838 755 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AL110118.1-201ENST00000553543 400 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 RNF138P2-201ENST00000603490 592 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AL162574.1-201ENST00000615702 950 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AC245389.2-201ENST00000616023 576 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 AC242843.1-201ENST00000618702 573 ntBASIC6.49□□□□□ -1.37
SCN11AQ9UI33 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
SCN11AQ9UI33 DHX40P1-201ENST00000588725 1412 ntBASIC6.48□□□□□ -1.37
SCN11AQ9UI33 AC010928.1-201ENST00000592477 1447 ntBASIC6.48□□□□□ -1.37
SCN11AQ9UI33 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 AP000547.3-204ENST00000588548 2523 ntBASIC6.48□□□□□ -1.37
SCN11AQ9UI33 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 Z95114.1-201ENST00000624264 14574 ntBASIC6.48□□□□□ -1.37
SCN11AQ9UI33 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 AL161722.1-201ENST00000446972 1032 ntBASIC6.48□□□□□ -1.37
SCN11AQ9UI33 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 AC068587.1-201ENST00000483613 781 ntBASIC6.48□□□□□ -1.37
SCN11AQ9UI33 AC116562.1-201ENST00000485355 781 ntBASIC6.48□□□□□ -1.37
SCN11AQ9UI33 OR2A3P-201ENST00000493774 953 ntBASIC6.48□□□□□ -1.37
SCN11AQ9UI33 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms