Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL359513.1-201ENST00000614364 557 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AL354696.1-201ENST00000614652 497 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 RNA5SP439-201ENST00000617595 124 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AP003499.2-201ENST00000624100 483 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AL691477.1-201ENST00000624398 162 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AL137141.1-201ENST00000624622 4836 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 RNA5SP335-201ENST00000363817 110 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 RNA5SP242-201ENST00000364171 118 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 GPS2P1-201ENST00000411761 986 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 Z93019.1-201ENST00000416450 973 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 GAPDHP34-201ENST00000432112 823 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 GSTM5P1-201ENST00000434751 660 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 RPL12P11-201ENST00000439970 501 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 BTBD7P2-201ENST00000441962 620 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AL672138.1-201ENST00000450604 1015 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 RPL5P13-201ENST00000462840 709 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 RPL7P51-201ENST00000490532 749 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AC021087.2-201ENST00000504656 1203 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 HMGB1P44-201ENST00000508597 572 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AC093770.1-201ENST00000511559 571 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AL589674.2-201ENST00000604304 337 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 WBP1LP8-201ENST00000617401 327 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 uc_338.7-201ENST00000621834 124 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 AC109446.4-201ENST00000623235 2755 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 ADAM24P-201ENST00000398655 2101 ntBASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.04□□□□□ -1.44
BLOC1S4Q9NUP1 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 RNU6-249P-201ENST00000363016 102 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 RN7SKP69-201ENST00000365390 305 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AL133388.1-201ENST00000404509 287 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 RNA5SP178-201ENST00000410380 128 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 RPL26P37-201ENST00000411983 438 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 RPL12P17-201ENST00000432393 498 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AC100832.1-201ENST00000471945 383 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AC092754.1-201ENST00000472975 479 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AC058823.1-201ENST00000485315 474 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 EIF1P7-201ENST00000487533 337 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 BTG4P1-201ENST00000510421 183 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms