Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.89□□□□□ -1.47
USP29Q9HBJ7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 TMSB4XP2-201ENST00000335179 210 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 MIR130A-201ENST00000385274 89 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 U3.25-201ENST00000391209 220 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 NIFKP3-201ENST00000417799 865 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 BX119321.1-201ENST00000428912 797 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 MTCYBP15-201ENST00000433123 1127 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC099670.2-201ENST00000435130 321 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 NPM1P17-201ENST00000479221 602 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC073610.1-201ENST00000489971 396 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 OR9N1P-202ENST00000494289 481 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 UBE2V1P12-201ENST00000503954 474 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 MTCO1P31-201ENST00000506355 492 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AP003355.1-201ENST00000518956 587 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC139697.1-201ENST00000548429 745 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 YWHAZP1-201ENST00000556286 722 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC106730.2-201ENST00000566641 540 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 RN7SL339P-201ENST00000580597 296 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 MIR8084-201ENST00000614105 89 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC099654.9-201ENST00000637055 678 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 NEPNP-201ENST00000404786 1371 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 PDZK1P1-202ENST00000425209 1350 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 AC017002.4-201ENST00000604721 1525 ntBASIC5.88□□□□□ -1.47
USP29Q9HBJ7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP29Q9HBJ7 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC006206.1-201ENST00000544842 3387 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 MTHFD2P5-201ENST00000320415 844 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AL159987.1-201ENST00000347911 293 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 Z86062.1-201ENST00000406773 777 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC096921.1-201ENST00000411661 375 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AL024507.1-201ENST00000412741 274 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 BRWD1P3-201ENST00000428816 390 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC004854.1-201ENST00000440356 349 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 MTND1P26-201ENST00000440488 538 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 RAB28P3-201ENST00000448325 597 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 STRADBP1-201ENST00000478954 1281 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC015864.1-201ENST00000496512 544 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC105420.1-201ENST00000504389 582 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC074255.1-201ENST00000511259 501 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 RNU6-319P-201ENST00000516025 108 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC067904.2-201ENST00000517322 1283 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC084824.2-201ENST00000548906 345 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 MTND1P24-201ENST00000552175 861 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC022404.1-201ENST00000555320 273 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC084759.1-201ENST00000561168 290 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 RN7SL787P-201ENST00000613000 284 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 MIR1264-201ENST00000616374 69 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC073342.3-201ENST00000624211 193 ntBASIC5.87□□□□□ -1.47
USP29Q9HBJ7 AC005618.4-201ENST00000625053 554 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms