Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC025459.1-201ENST00000504072 156 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 HIGD1AP18-201ENST00000520730 278 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC018442.3-201ENST00000523025 183 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC019227.1-201ENST00000526902 510 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 PMS2P3-207ENST00000529061 717 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 MIR4311-201ENST00000580794 100 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 MTND5P11-201ENST00000511037 1812 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 RNU6-225P-201ENST00000384613 103 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 MIR320B1-201ENST00000390209 79 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC092570.3-201ENST00000420113 693 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC023271.1-201ENST00000445936 1090 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 NXT1P1-201ENST00000458481 316 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 ACA64.1-201ENST00000459171 127 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AP002884.1-201ENST00000479691 655 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC022215.1-201ENST00000481770 362 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC097486.1-201ENST00000515331 210 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 RNU6-1004P-201ENST00000516584 111 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC060775.1-201ENST00000518241 520 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 HAUS1P3-201ENST00000523909 662 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 IGLV3-30-201ENST00000524362 298 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 UBTFL9-201ENST00000534504 1148 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC122688.1-201ENST00000541494 223 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC063977.5-201ENST00000601044 974 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AF230666.2-201ENST00000602328 725 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC079880.2-201ENST00000603790 1213 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 OR8G3P-202ENST00000641572 1255 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 AC015799.1-201ENST00000622996 3122 ntBASIC5.43□□□□□ -1.54
BRF2Q9HAW0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
BRF2Q9HAW0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms