Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL645733.1-201ENST00000402250 217 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 RN7SKP247-201ENST00000411094 308 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AL591623.2-201ENST00000449978 222 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 AL672167.3-201ENST00000465951 960 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC020779.1-201ENST00000478757 796 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 AL049874.2-201ENST00000492636 288 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 RN7SL57P-201ENST00000493687 290 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 SNORA43.3-201ENST00000517240 103 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 IGLV3-30-201ENST00000524362 298 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AL136131.3-201ENST00000607600 188 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC010632.3-201ENST00000611377 369 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM4Q9C037 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM4Q9C037 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM4Q9C037 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM4Q9C037 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM4Q9C037 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 TTC39DP-201ENST00000416781 1688 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 CASC19-221ENST00000641309 1382 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 RNA5SP500-201ENST00000364486 119 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 MIR141-201ENST00000384975 95 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 MIR223-201ENST00000385204 110 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC016397.1-201ENST00000412463 242 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 RBMY2KP-201ENST00000418221 992 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AL390119.1-201ENST00000440329 312 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC093166.4-201ENST00000457867 318 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 RPL7AP6-201ENST00000477943 801 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 RPSAP50-201ENST00000481955 852 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AL049872.1-201ENST00000556323 322 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 RN7SL708P-201ENST00000580952 299 ntBASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TRIM4Q9C037 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM4Q9C037 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM4Q9C037 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM4Q9C037 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM4Q9C037 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM4Q9C037 VDAC1P6-201ENST00000430062 855 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms