Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 GTF2IP11-201ENST00000526931 420 ntBASIC7.79□□□□□ -1.16
SCAPERQ9BY12 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.79□□□□□ -1.16
SCAPERQ9BY12 AC069542.2-201ENST00000624816 216 ntBASIC7.79□□□□□ -1.16
SCAPERQ9BY12 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC7.79□□□□□ -1.16
SCAPERQ9BY12 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.79□□□□□ -1.16
SCAPERQ9BY12 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.79□□□□□ -1.16
SCAPERQ9BY12 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCAPERQ9BY12 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCAPERQ9BY12 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AL049693.1-201ENST00000402760 611 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 RPL12P43-201ENST00000420608 499 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AC012519.1-201ENST00000424588 610 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 BX323845.1-201ENST00000432417 179 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 OR7E125P-201ENST00000443450 846 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 GLUD1P3-202ENST00000508551 200 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 MORF4L1P3-201ENST00000525966 950 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AL162431.4-201ENST00000604674 411 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AL445423.1-201ENST00000609941 536 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AL355834.1-201ENST00000556602 3965 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AC100757.1-201ENST00000616872 1835 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AL031123.3-201ENST00000623345 1837 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AL359715.3-201ENST00000569267 2123 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 CHIAP3-201ENST00000423668 1133 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AC021876.1-201ENST00000425959 359 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 LINC02210-201ENST00000444561 288 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 NUTF2P7-201ENST00000453086 375 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 NMNAT1P1-201ENST00000554095 876 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 AL590392.1-201ENST00000604960 446 ntBASIC7.78□□□□□ -1.16
SCAPERQ9BY12 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC7.78□□□□□ -1.16
SCAPERQ9BY12 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
SCAPERQ9BY12 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.16
SCAPERQ9BY12 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 CCAT2-201ENST00000630920 1752 ntBASIC7.77□□□□□ -1.17
SCAPERQ9BY12 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 FHIT-201ENST00000341848 174 ntTSL 3 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 OR8V1P-201ENST00000395193 873 ntBASIC7.77□□□□□ -1.17
SCAPERQ9BY12 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 AL354714.3-201ENST00000447284 493 ntBASIC7.77□□□□□ -1.17
SCAPERQ9BY12 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 AL356390.1-201ENST00000455684 397 ntBASIC7.77□□□□□ -1.17
SCAPERQ9BY12 RN7SKP122-201ENST00000515923 296 ntBASIC7.77□□□□□ -1.17
SCAPERQ9BY12 RN7SKP21-201ENST00000516503 220 ntBASIC7.77□□□□□ -1.17
SCAPERQ9BY12 MAL2-201ENST00000522112 573 ntTSL 4 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 OR4A17P-201ENST00000526032 904 ntBASIC7.77□□□□□ -1.17
SCAPERQ9BY12 AC009643.1-201ENST00000532030 391 ntBASIC7.77□□□□□ -1.17
SCAPERQ9BY12 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.77□□□□□ -1.17
SCAPERQ9BY12 SAMMSON-226ENST00000642089 1582 ntBASIC7.76□□□□□ -1.17
SCAPERQ9BY12 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 Z97832.1-201ENST00000402490 328 ntBASIC7.76□□□□□ -1.17
SCAPERQ9BY12 PPIAP9-201ENST00000403866 498 ntBASIC7.76□□□□□ -1.17
SCAPERQ9BY12 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 IGHV5-78-201ENST00000450948 295 ntBASIC7.76□□□□□ -1.17
SCAPERQ9BY12 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.76□□□□□ -1.17
SCAPERQ9BY12 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms