Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 CYCSP10-201ENST00000417973 294 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 EIF4A1P1-201ENST00000420241 934 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AC005297.1-201ENST00000444765 862 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AL450996.1-201ENST00000445574 1202 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AC079168.1-201ENST00000458741 345 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AC026616.1-201ENST00000523157 525 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 IGBP1P1-201ENST00000554337 1009 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AL845552.1-201ENST00000556820 323 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 RNF138P2-201ENST00000603490 592 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 AC100814.1-201ENST00000606963 623 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 CASC19-274ENST00000642018 970 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 MUC2-202ENST00000613187 4845 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 OR51H2P-202ENST00000641424 3046 ntBASIC5.15□□□□□ -1.58
CCDC28BQ9BUN5 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CCDC28BQ9BUN5 MTCO1P15-201ENST00000529569 1526 ntBASIC5.15□□□□□ -1.58
CCDC28BQ9BUN5 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 RNU1-146P-201ENST00000364015 165 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 TRAV35-201ENST00000390462 330 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 MARK2P12-201ENST00000420129 585 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 SETP10-201ENST00000424368 814 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 ARL4AP4-201ENST00000434170 518 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AL591623.2-201ENST00000449978 222 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AC025458.1-201ENST00000506046 166 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 MRPS21P7-201ENST00000566937 238 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AC012616.1-201ENST00000600294 197 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AL162431.4-201ENST00000604674 411 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AC018695.5-201ENST00000605872 315 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 AC129915.3-201ENST00000634128 948 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 LINC01355-201ENST00000566551 5444 ntBASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC28BQ9BUN5 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 OR7E25P-201ENST00000344844 931 ntBASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 HMGB1P44-201ENST00000508597 572 ntBASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 SCARNA16.4-201ENST00000516956 187 ntBASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AC011270.1-201ENST00000558606 583 ntBASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AC087283.1-201ENST00000604029 1074 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms