Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 NPM1P29-201ENST00000483112 803 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 FABP5P6-201ENST00000510588 409 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 HMGB1P47-201ENST00000511281 589 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX3Q99909 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX3Q99909 IGKV2-4-201ENST00000523070 340 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSX3Q99909 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX3Q99909 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX3Q99909 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX3Q99909 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX3Q99909 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX3Q99909 MIR4776-2-201ENST00000580204 80 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AC068020.1-201ENST00000594215 661 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AC130352.1-201ENST00000602979 661 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AC100767.2-201ENST00000604840 693 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AL136131.3-201ENST00000607600 188 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AC005021.1-201ENST00000608730 355 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 MIR6809-201ENST00000612189 116 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AL021918.2-201ENST00000613415 194 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AC104307.1-201ENST00000616142 196 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AL162233.1-201ENST00000620014 944 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AL355480.1-201ENST00000629041 99 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AC107027.3-201ENST00000565095 3473 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SSX3Q99909 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX3Q99909 BX005019.1-201ENST00000561881 1810 ntBASIC4.83□□□□□ -1.64
SSX3Q99909 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX3Q99909 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX3Q99909 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX3Q99909 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX3Q99909 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SSX3Q99909 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SSX3Q99909 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX3Q99909 OR55B1P-203ENST00000641518 2602 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX3Q99909 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SSX3Q99909 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX3Q99909 SNORA27.3-201ENST00000364937 134 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 BMS1P3-201ENST00000372011 932 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 RNU6-178P-201ENST00000384631 104 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 RN7SKP286-201ENST00000410894 299 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX3Q99909 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX3Q99909 AL035660.1-201ENST00000422041 222 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 RPS26P47-201ENST00000427219 348 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX3Q99909 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX3Q99909 AL731534.1-201ENST00000434711 269 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 AC046176.1-201ENST00000435260 1170 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX3Q99909 Z99127.2-201ENST00000441426 334 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.82□□□□□ -1.64
SSX3Q99909 RN7SL197P-201ENST00000466981 299 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 RN7SL269P-201ENST00000467795 305 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
SSX3Q99909 AC124945.1-201ENST00000485133 188 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 RPL23AP40-201ENST00000487630 390 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.82□□□□□ -1.64
SSX3Q99909 AC008629.2-201ENST00000503783 483 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX3Q99909 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX3Q99909 AC034244.2-201ENST00000514668 858 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.82□□□□□ -1.64
SSX3Q99909 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX3Q99909 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX3Q99909 PCNAP4-201ENST00000532690 730 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 AC125612.1-201ENST00000547580 377 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX3Q99909 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX3Q99909 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.82□□□□□ -1.64
SSX3Q99909 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.82□□□□□ -1.64
SSX3Q99909 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX3Q99909 MIMT1-201ENST00000597105 1050 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX3Q99909 AC003001.2-201ENST00000616294 831 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 AC074276.2-201ENST00000619891 348 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.82□□□□□ -1.64
SSX3Q99909 AC026124.2-201ENST00000621847 656 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 AC015908.5-201ENST00000623289 343 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 MUC2-202ENST00000613187 4845 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX3Q99909 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
SSX3Q99909 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SSX3Q99909 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSX3Q99909 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSX3Q99909 AC027088.4-201ENST00000611559 1947 ntBASIC4.82□□□□□ -1.64
SSX3Q99909 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
SSX3Q99909 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 THAP12P5-201ENST00000405864 2275 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX3Q99909 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SSX3Q99909 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.81□□□□□ -1.64
SSX3Q99909 RN7SKP224-201ENST00000364140 325 ntBASIC4.81□□□□□ -1.64
SSX3Q99909 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX3Q99909 RNU6-883P-201ENST00000384597 107 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms