Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5□□□□□ -1.61
COL21A1Q96P44 SPRYD7P1-201ENST00000443861 570 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5□□□□□ -1.61
COL21A1Q96P44 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5□□□□□ -1.61
COL21A1Q96P44 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 RN7SL447P-201ENST00000494711 245 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 AC108693.1-201ENST00000496068 432 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5□□□□□ -1.61
COL21A1Q96P44 AC111000.5-201ENST00000506559 1178 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5□□□□□ -1.61
COL21A1Q96P44 BX510359.5-201ENST00000515651 304 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 SCARNA21.2-201ENST00000516600 166 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5□□□□□ -1.61
COL21A1Q96P44 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5□□□□□ -1.61
COL21A1Q96P44 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5□□□□□ -1.61
COL21A1Q96P44 BLZF2P-201ENST00000553776 1130 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 AC006349.1-201ENST00000555526 235 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5□□□□□ -1.61
COL21A1Q96P44 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5□□□□□ -1.61
COL21A1Q96P44 AC005341.1-201ENST00000571086 708 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 RN7SL356P-201ENST00000582228 248 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 MIR6768-201ENST00000610734 72 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 AC109583.2-201ENST00000617367 129 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 AC005840.5-201ENST00000619166 599 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 AC241377.1-201ENST00000619797 406 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL21A1Q96P44 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 AC025574.1-201ENST00000554784 1653 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 AC114947.2-201ENST00000565748 2125 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 AC017079.1-201ENST00000333650 415 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 RNA5SP335-201ENST00000363817 110 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 AC009804.1-201ENST00000400949 179 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 RPL12P9-201ENST00000412942 488 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 PRUNEP1-201ENST00000425846 705 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 RPL7P45-201ENST00000455851 743 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 SIAH1P1-201ENST00000479411 923 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 RPL7L1P4-201ENST00000513004 707 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 AC093591.2-201ENST00000565254 3843 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 AC007204.2-201ENST00000615022 616 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 WBP1LP8-201ENST00000617401 327 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 AP003400.3-201ENST00000624904 346 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 TCP1P3-201ENST00000414406 1498 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 MTCO1P46-201ENST00000451639 1491 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
COL21A1Q96P44 AP005432.1-201ENST00000580891 3485 ntBASIC4.99□□□□□ -1.61
COL21A1Q96P44 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL21A1Q96P44 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 OR9G4-201ENST00000302957 984 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 MIR133B-201ENST00000362210 119 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 AL133388.1-201ENST00000404509 287 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms