Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC009963.3-201ENST00000458090 486 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 SNORD125-201ENST00000459538 96 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 RPS23P2-201ENST00000463671 415 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 RPS17P5-201ENST00000498293 408 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC112484.3-201ENST00000505910 329 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AL158068.1-201ENST00000506116 616 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC068993.1-201ENST00000546724 589 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC121758.1-202ENST00000556917 658 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC091078.2-201ENST00000557145 559 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC084759.1-201ENST00000561168 290 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC021483.2-201ENST00000567415 758 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 RN7SL339P-201ENST00000580597 296 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 MIR4260-201ENST00000583107 67 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC011500.1-201ENST00000601963 469 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC105105.5-201ENST00000622635 1294 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC008993.2-201ENST00000631744 806 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC093225.1-201ENST00000506867 1408 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AL121886.1-201ENST00000358609 435 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 RN7SKP250-201ENST00000363924 321 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 RNU6-796P-201ENST00000391086 107 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 RNU6-584P-201ENST00000410350 95 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 TATDN1P1-201ENST00000414123 891 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 HYALP1-201ENST00000417674 1279 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 RNF10P1-201ENST00000418589 369 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AL160175.1-201ENST00000428124 247 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 Z84478.1-201ENST00000438230 1219 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 AC004854.1-201ENST00000440356 349 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 RPS10P18-201ENST00000442662 495 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 HSPD1P7-201ENST00000447985 1686 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 DDX18P6-201ENST00000450119 1997 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 CYCSP20-201ENST00000473154 315 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 RN7SL568P-201ENST00000493069 298 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 EIF3LP3-201ENST00000495197 822 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 OR5H3P-201ENST00000502817 919 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 WBP1LP3-201ENST00000523033 208 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms