Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 AC073333.2-201ENST00000603589 769 ntBASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 AL592494.3-201ENST00000609485 464 ntBASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 AL133243.2-201ENST00000610331 1621 ntBASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM3Q53GG5 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 Z95331.1-201ENST00000623075 23112 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 MFSD8-219ENST00000641228 2559 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 LINC01963-201ENST00000562038 3148 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 RNA5SP273-201ENST00000362484 113 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 U3.10-201ENST00000364459 214 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 RNU6-1251P-201ENST00000364502 107 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 RNA5SP132-201ENST00000364725 118 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 RNA5SP296-201ENST00000410523 111 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 Z99127.2-201ENST00000441426 334 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 CCRL1P1-201ENST00000449542 1053 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 RN7SL329P-201ENST00000467740 299 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 OR9N1P-202ENST00000494289 481 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC021087.2-201ENST00000504656 1203 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 SULT1C2P2-201ENST00000562517 294 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC007346.2-201ENST00000564816 892 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 MTND4LP25-201ENST00000570218 163 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 TXNP4-201ENST00000575018 310 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 MIR1269B-201ENST00000580405 75 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AL671309.1-201ENST00000603750 544 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 BNIP3P19-201ENST00000605397 577 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 CR589904.2-201ENST00000612533 440 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC253576.2-201ENST00000618815 580 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC021766.1-201ENST00000624404 741 ntBASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM3Q53GG5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 AL138820.1-201ENST00000617901 5305 ntBASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 AC024587.1-201ENST00000505925 2157 ntBASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 AL022322.2-201ENST00000624072 20397 ntBASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 AC073464.3-201ENST00000422564 712 ntBASIC4.84□□□□□ -1.63
PDLIM3Q53GG5 TNPO1P1-201ENST00000423641 1138 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms