Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.08□□□□□ -1.44
GABPAQ06546 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
GABPAQ06546 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GABPAQ06546 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
GABPAQ06546 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
GABPAQ06546 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GABPAQ06546 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.08□□□□□ -1.44
GABPAQ06546 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
GABPAQ06546 RN7SKP95-201ENST00000362860 303 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.08□□□□□ -1.44
GABPAQ06546 AL121578.1-201ENST00000428051 892 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 BX276092.6-201ENST00000430476 250 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.08□□□□□ -1.44
GABPAQ06546 RPL31P44-201ENST00000447680 377 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 BX276092.8-201ENST00000455722 250 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.08□□□□□ -1.44
GABPAQ06546 AC022133.1-201ENST00000490961 571 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.08□□□□□ -1.44
GABPAQ06546 AC097173.1-201ENST00000505862 819 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 IMPA1P1-201ENST00000510718 842 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.08□□□□□ -1.44
GABPAQ06546 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.08□□□□□ -1.44
GABPAQ06546 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.08□□□□□ -1.44
GABPAQ06546 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.08□□□□□ -1.44
GABPAQ06546 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.08□□□□□ -1.44
GABPAQ06546 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.08□□□□□ -1.44
GABPAQ06546 AC093524.1-201ENST00000564266 1094 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GABPAQ06546 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.08□□□□□ -1.44
GABPAQ06546 AC087783.2-201ENST00000605070 562 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 FAM25E-202ENST00000608562 189 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 AP001784.1-201ENST00000624107 428 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.08□□□□□ -1.44
GABPAQ06546 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.08□□□□□ -1.44
GABPAQ06546 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.08□□□□□ -1.44
GABPAQ06546 AC083843.2-201ENST00000568248 6253 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GABPAQ06546 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GABPAQ06546 AL138820.1-201ENST00000617901 5305 ntBASIC6.08□□□□□ -1.44
GABPAQ06546 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.07□□□□□ -1.44
GABPAQ06546 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GABPAQ06546 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GABPAQ06546 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GABPAQ06546 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
GABPAQ06546 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
GABPAQ06546 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
GABPAQ06546 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
GABPAQ06546 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
GABPAQ06546 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
GABPAQ06546 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.07□□□□□ -1.44
GABPAQ06546 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 AC007996.1-201ENST00000620414 2821 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 RNA5SP455-201ENST00000365190 119 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GABPAQ06546 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.07□□□□□ -1.44
GABPAQ06546 BX323845.1-201ENST00000432417 179 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.07□□□□□ -1.44
GABPAQ06546 AC091685.2-201ENST00000454924 864 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 RPS3AP41-201ENST00000462701 778 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 RN7SL189P-201ENST00000468631 289 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 IGLV2-34-201ENST00000490007 283 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 AC105233.1-201ENST00000498840 781 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.07□□□□□ -1.44
GABPAQ06546 AC022616.2-201ENST00000523185 300 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.07□□□□□ -1.44
GABPAQ06546 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.07□□□□□ -1.44
GABPAQ06546 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.07□□□□□ -1.44
GABPAQ06546 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.07□□□□□ -1.44
GABPAQ06546 MEMO1P5-201ENST00000604810 406 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 AC007786.3-201ENST00000615154 596 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 AC091905.4-201ENST00000623432 202 ntBASIC6.07□□□□□ -1.44
GABPAQ06546 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.07□□□□□ -1.44
GABPAQ06546 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.07□□□□□ -1.44
GABPAQ06546 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GABPAQ06546 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GABPAQ06546 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GABPAQ06546 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.07□□□□□ -1.44
GABPAQ06546 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GABPAQ06546 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GABPAQ06546 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 AL137058.3-201ENST00000624531 3099 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.06□□□□□ -1.44
GABPAQ06546 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
GABPAQ06546 RNA5SP514-201ENST00000363717 111 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 RNA5SP428-201ENST00000365129 132 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.06□□□□□ -1.44
GABPAQ06546 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.06□□□□□ -1.44
GABPAQ06546 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.06□□□□□ -1.44
GABPAQ06546 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.06□□□□□ -1.44
GABPAQ06546 RPS3AP53-201ENST00000454716 778 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 AC020779.1-201ENST00000478757 796 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.06□□□□□ -1.44
GABPAQ06546 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.06□□□□□ -1.44
GABPAQ06546 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.06□□□□□ -1.44
GABPAQ06546 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms