Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 RNU6-761P-201ENST00000384148 107 ntBASIC6.3□□□□□ -1.4
YBX1P67809 SNORA11B-201ENST00000408175 129 ntBASIC6.3□□□□□ -1.4
YBX1P67809 RNU6-757P-201ENST00000410334 100 ntBASIC6.3□□□□□ -1.4
YBX1P67809 RNU4-74P-201ENST00000411280 161 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 AC098592.2-201ENST00000413158 265 ntBASIC6.3□□□□□ -1.4
YBX1P67809 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.3□□□□□ -1.4
YBX1P67809 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 IPMKP1-201ENST00000425988 855 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.3□□□□□ -1.4
YBX1P67809 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 AL606662.1-201ENST00000445763 553 ntBASIC6.3□□□□□ -1.4
YBX1P67809 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.3□□□□□ -1.4
YBX1P67809 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 MTCO3P38-201ENST00000468910 766 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 AC105918.1-201ENST00000474399 838 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AL024509.2-201ENST00000493462 493 ntBASIC6.3□□□□□ -1.4
YBX1P67809 OR7E157P-201ENST00000494376 911 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC093281.2-201ENST00000510153 597 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC116917.1-201ENST00000520558 305 ntBASIC6.3□□□□□ -1.4
YBX1P67809 KCTD9P6-201ENST00000522306 950 ntBASIC6.3□□□□□ -1.4
YBX1P67809 IGLV3-6-201ENST00000523937 250 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.3□□□□□ -1.4
YBX1P67809 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.3□□□□□ -1.4
YBX1P67809 AC023310.2-201ENST00000553844 547 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC006530.1-201ENST00000555980 571 ntBASIC6.3□□□□□ -1.4
YBX1P67809 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.3□□□□□ -1.4
YBX1P67809 AC012435.1-202ENST00000568772 240 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 RN7SL475P-201ENST00000583379 298 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC090616.1-201ENST00000583895 447 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 AC090181.2-201ENST00000602975 672 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC091193.1-201ENST00000604640 448 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC018690.1-201ENST00000608144 626 ntBASIC6.3□□□□□ -1.4
YBX1P67809 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.3□□□□□ -1.4
YBX1P67809 AC010678.1-201ENST00000614118 713 ntBASIC6.3□□□□□ -1.4
YBX1P67809 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.3□□□□□ -1.4
YBX1P67809 AL133370.2-201ENST00000619934 439 ntBASIC6.3□□□□□ -1.4
YBX1P67809 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.3□□□□□ -1.4
YBX1P67809 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 MRPL57P1-201ENST00000621486 265 ntBASIC6.3□□□□□ -1.4
YBX1P67809 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
YBX1P67809 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 AC007603.3-201ENST00000636915 979 ntBASIC6.3□□□□□ -1.4
YBX1P67809 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
YBX1P67809 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.3□□□□□ -1.4
YBX1P67809 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.3□□□□□ -1.4
YBX1P67809 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 AL603750.1-201ENST00000624216 1717 ntBASIC6.3□□□□□ -1.4
YBX1P67809 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.3□□□□□ -1.4
YBX1P67809 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
YBX1P67809 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.29□□□□□ -1.4
YBX1P67809 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.29□□□□□ -1.4
YBX1P67809 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 SNORD35A-201ENST00000363389 86 ntBASIC6.29□□□□□ -1.4
YBX1P67809 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
YBX1P67809 AL451142.1-201ENST00000375867 775 ntBASIC6.29□□□□□ -1.4
YBX1P67809 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
YBX1P67809 VN1R12P-201ENST00000403778 876 ntBASIC6.29□□□□□ -1.4
YBX1P67809 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.29□□□□□ -1.4
YBX1P67809 RN7SKP146-201ENST00000410242 334 ntBASIC6.29□□□□□ -1.4
YBX1P67809 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AL359092.1-201ENST00000417156 265 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AC005189.1-201ENST00000431286 310 ntBASIC6.29□□□□□ -1.4
YBX1P67809 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.29□□□□□ -1.4
YBX1P67809 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.29□□□□□ -1.4
YBX1P67809 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 VN1R34P-201ENST00000447387 883 ntBASIC6.29□□□□□ -1.4
YBX1P67809 IGBP1P3-201ENST00000447449 1000 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.29□□□□□ -1.4
YBX1P67809 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.29□□□□□ -1.4
YBX1P67809 CST12P-201ENST00000457644 362 ntBASIC6.29□□□□□ -1.4
YBX1P67809 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms