Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 RMST_9.1-201ENST00000619945 193 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 uc_338.7-201ENST00000621834 124 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 AL357140.4-201ENST00000636827 412 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 AC138627.1-204ENST00000641894 765 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS1BP61024 AC022306.1-201ENST00000560489 1562 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS1BP61024 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CKS1BP61024 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.79□□□□□ -1.8
CKS1BP61024 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CKS1BP61024 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 AL121950.1-201ENST00000624993 2077 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS1BP61024 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS1BP61024 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS1BP61024 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS1BP61024 AC092435.4-201ENST00000623012 4159 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS1BP61024 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS1BP61024 RNU6-1279P-201ENST00000383917 103 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 MIR551B-201ENST00000384984 96 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC104297.1-201ENST00000393779 870 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 RPL5P19-201ENST00000404228 893 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CKS1BP61024 AL160275.2-201ENST00000412010 394 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC099336.2-201ENST00000422457 254 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC104333.2-201ENST00000422630 192 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 KIF4CP-201ENST00000422742 1279 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC126120.1-201ENST00000431082 470 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 RPS6P12-201ENST00000432491 726 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC073465.2-201ENST00000440938 498 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC007383.1-201ENST00000445875 636 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC005077.1-201ENST00000449226 375 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC099560.2-201ENST00000457554 255 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC010469.1-201ENST00000463864 576 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 RN7SL269P-201ENST00000467795 305 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AL157777.1-201ENST00000468100 304 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC112206.1-201ENST00000468416 477 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC3.78□□□□□ -1.8
CKS1BP61024 RN7SL57P-201ENST00000493687 290 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC073358.1-201ENST00000505671 684 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC018797.3-201ENST00000513388 1241 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS1BP61024 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CKS1BP61024 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS1BP61024 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.78□□□□□ -1.8
CKS1BP61024 MT1CP-201ENST00000567054 174 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 MIR3157-201ENST00000578688 85 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS1BP61024 DHFRP1-201ENST00000579682 559 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC005244.1-201ENST00000582566 339 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS1BP61024 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC067838.1-201ENST00000606064 577 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 MIR6885-201ENST00000612241 66 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AC078899.5-201ENST00000612475 178 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AL080312.2-201ENST00000613001 630 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 AL121873.1-201ENST00000616013 524 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CKS1BP61024 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS1BP61024 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 QRSL1P1-201ENST00000400977 1540 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS1BP61024 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS1BP61024 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS1BP61024 AC008627.1-201ENST00000517511 1704 ntBASIC3.78□□□□□ -1.8
CKS1BP61024 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CKS1BP61024 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.78□□□□□ -1.8
CKS1BP61024 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 AC022417.1-201ENST00000624768 1303 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms