Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDX1P52945 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.31□□□□□ -1.56
PDX1P52945 GVINP1-202ENST00000531871 7271 ntBASIC5.31□□□□□ -1.56
PDX1P52945 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.31□□□□□ -1.56
PDX1P52945 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDX1P52945 RNU1-136P-201ENST00000384181 164 ntBASIC5.31□□□□□ -1.56
PDX1P52945 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDX1P52945 MIR550A3-201ENST00000390735 95 ntBASIC5.31□□□□□ -1.56
PDX1P52945 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.31□□□□□ -1.56
PDX1P52945 RAB9AP4-201ENST00000415230 609 ntBASIC5.31□□□□□ -1.56
PDX1P52945 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.31□□□□□ -1.56
PDX1P52945 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.31□□□□□ -1.56
PDX1P52945 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.31□□□□□ -1.56
PDX1P52945 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.31□□□□□ -1.56
PDX1P52945 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.31□□□□□ -1.56
PDX1P52945 RPL7P61-201ENST00000451721 751 ntBASIC5.31□□□□□ -1.56
PDX1P52945 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.31□□□□□ -1.56
PDX1P52945 RPL37AP8-201ENST00000494116 276 ntBASIC5.31□□□□□ -1.56
PDX1P52945 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.31□□□□□ -1.56
PDX1P52945 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.31□□□□□ -1.56
PDX1P52945 AC117525.1-201ENST00000515228 503 ntBASIC5.31□□□□□ -1.56
PDX1P52945 RN7SKP99-201ENST00000517028 307 ntBASIC5.31□□□□□ -1.56
PDX1P52945 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.31□□□□□ -1.56
PDX1P52945 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.31□□□□□ -1.56
PDX1P52945 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.31□□□□□ -1.56
PDX1P52945 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.31□□□□□ -1.56
PDX1P52945 AC139697.1-201ENST00000548429 745 ntBASIC5.31□□□□□ -1.56
PDX1P52945 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.31□□□□□ -1.56
PDX1P52945 AGGF1P7-201ENST00000562369 913 ntBASIC5.31□□□□□ -1.56
PDX1P52945 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.31□□□□□ -1.56
PDX1P52945 AL390726.5-202ENST00000564800 256 ntBASIC5.31□□□□□ -1.56
PDX1P52945 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.31□□□□□ -1.56
PDX1P52945 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.31□□□□□ -1.56
PDX1P52945 TAS2R6P-201ENST00000605022 826 ntBASIC5.31□□□□□ -1.56
PDX1P52945 NANOGP3-201ENST00000605855 286 ntBASIC5.31□□□□□ -1.56
PDX1P52945 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.31□□□□□ -1.56
PDX1P52945 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDX1P52945 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.31□□□□□ -1.56
PDX1P52945 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PDX1P52945 BCORP1-203ENST00000513194 5093 ntBASIC5.31□□□□□ -1.56
PDX1P52945 AC114774.1-201ENST00000507410 1770 ntBASIC5.31□□□□□ -1.56
PDX1P52945 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PDX1P52945 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PDX1P52945 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDX1P52945 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.3□□□□□ -1.56
PDX1P52945 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.3□□□□□ -1.56
PDX1P52945 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.3□□□□□ -1.56
PDX1P52945 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.3□□□□□ -1.56
PDX1P52945 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
PDX1P52945 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PDX1P52945 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 RN7SKP6-201ENST00000364795 319 ntBASIC5.3□□□□□ -1.56
PDX1P52945 AL353625.1-202ENST00000366273 571 ntBASIC5.3□□□□□ -1.56
PDX1P52945 SNORA16A-201ENST00000384342 137 ntBASIC5.3□□□□□ -1.56
PDX1P52945 MIR551A-201ENST00000385042 96 ntBASIC5.3□□□□□ -1.56
PDX1P52945 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PDX1P52945 AL109941.1-201ENST00000401925 229 ntBASIC5.3□□□□□ -1.56
PDX1P52945 Y_RNA.625-201ENST00000411256 107 ntBASIC5.3□□□□□ -1.56
PDX1P52945 AL356968.2-201ENST00000412769 1257 ntBASIC5.3□□□□□ -1.56
PDX1P52945 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.3□□□□□ -1.56
PDX1P52945 AL356806.1-201ENST00000422524 916 ntBASIC5.3□□□□□ -1.56
PDX1P52945 DSTNP5-201ENST00000427921 523 ntBASIC5.3□□□□□ -1.56
PDX1P52945 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.3□□□□□ -1.56
PDX1P52945 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.3□□□□□ -1.56
PDX1P52945 AC105399.1-202ENST00000447303 205 ntBASIC5.3□□□□□ -1.56
PDX1P52945 AL645937.3-201ENST00000453647 936 ntBASIC5.3□□□□□ -1.56
PDX1P52945 GAPDHP62-201ENST00000515313 990 ntBASIC5.3□□□□□ -1.56
PDX1P52945 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.3□□□□□ -1.56
PDX1P52945 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.3□□□□□ -1.56
PDX1P52945 AC084824.2-201ENST00000548906 345 ntBASIC5.3□□□□□ -1.56
PDX1P52945 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 AC106730.2-201ENST00000566641 540 ntBASIC5.3□□□□□ -1.56
PDX1P52945 AC133644.2-201ENST00000608142 540 ntBASIC5.3□□□□□ -1.56
PDX1P52945 WBP1LP8-201ENST00000617401 327 ntBASIC5.3□□□□□ -1.56
PDX1P52945 AL162233.1-201ENST00000620014 944 ntBASIC5.3□□□□□ -1.56
PDX1P52945 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.3□□□□□ -1.56
PDX1P52945 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PDX1P52945 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.3□□□□□ -1.56
PDX1P52945 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PDX1P52945 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PDX1P52945 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms