Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC009962.1-201ENST00000567327 3813 ntBASIC5.77□□□□□ -1.49
SSR1P43307 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.77□□□□□ -1.49
SSR1P43307 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSR1P43307 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSR1P43307 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSR1P43307 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.76□□□□□ -1.49
SSR1P43307 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSR1P43307 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SSR1P43307 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SSR1P43307 AC011755.1-201ENST00000623763 2049 ntBASIC5.76□□□□□ -1.49
SSR1P43307 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SSR1P43307 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSR1P43307 RNA5SP510-201ENST00000364697 99 ntBASIC5.76□□□□□ -1.49
SSR1P43307 RN7SKP6-201ENST00000364795 319 ntBASIC5.76□□□□□ -1.49
SSR1P43307 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSR1P43307 ATP5F1P2-201ENST00000398143 760 ntBASIC5.76□□□□□ -1.49
SSR1P43307 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SSR1P43307 PPIAP9-201ENST00000403866 498 ntBASIC5.76□□□□□ -1.49
SSR1P43307 EEF1B2P8-201ENST00000414101 671 ntBASIC5.76□□□□□ -1.49
SSR1P43307 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.76□□□□□ -1.49
SSR1P43307 VDAC2P4-201ENST00000452925 711 ntBASIC5.76□□□□□ -1.49
SSR1P43307 NDUFA5P5-201ENST00000468361 342 ntBASIC5.76□□□□□ -1.49
SSR1P43307 RN7SL809P-201ENST00000482040 297 ntBASIC5.76□□□□□ -1.49
SSR1P43307 RPSAP51-201ENST00000497462 645 ntBASIC5.76□□□□□ -1.49
SSR1P43307 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
SSR1P43307 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.76□□□□□ -1.49
SSR1P43307 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.76□□□□□ -1.49
SSR1P43307 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSR1P43307 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.76□□□□□ -1.49
SSR1P43307 PDCD5P1-201ENST00000543528 309 ntBASIC5.76□□□□□ -1.49
SSR1P43307 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.76□□□□□ -1.49
SSR1P43307 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.76□□□□□ -1.49
SSR1P43307 AC107958.1-201ENST00000556576 290 ntBASIC5.76□□□□□ -1.49
SSR1P43307 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.76□□□□□ -1.49
SSR1P43307 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.76□□□□□ -1.49
SSR1P43307 AC008115.3-201ENST00000614874 549 ntBASIC5.76□□□□□ -1.49
SSR1P43307 AL596275.2-204ENST00000641628 552 ntBASIC5.76□□□□□ -1.49
SSR1P43307 AL596275.2-206ENST00000641957 626 ntBASIC5.76□□□□□ -1.49
SSR1P43307 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSR1P43307 AC003973.3-201ENST00000624863 2822 ntBASIC5.76□□□□□ -1.49
SSR1P43307 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.76□□□□□ -1.49
SSR1P43307 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.76□□□□□ -1.49
SSR1P43307 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSR1P43307 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSR1P43307 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
SSR1P43307 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SSR1P43307 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.75□□□□□ -1.49
SSR1P43307 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.75□□□□□ -1.49
SSR1P43307 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SSR1P43307 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SSR1P43307 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.75□□□□□ -1.49
SSR1P43307 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SSR1P43307 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.75□□□□□ -1.49
SSR1P43307 EIF4A1P3-201ENST00000411521 244 ntBASIC5.75□□□□□ -1.49
SSR1P43307 SLC20A1P1-201ENST00000413906 956 ntBASIC5.75□□□□□ -1.49
SSR1P43307 AC007161.1-204ENST00000423039 460 ntBASIC5.75□□□□□ -1.49
SSR1P43307 AL133173.1-201ENST00000423458 397 ntBASIC5.75□□□□□ -1.49
SSR1P43307 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.75□□□□□ -1.49
SSR1P43307 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.75□□□□□ -1.49
SSR1P43307 RPSAP41-201ENST00000439695 860 ntBASIC5.75□□□□□ -1.49
SSR1P43307 RPL36AP39-201ENST00000445859 318 ntBASIC5.75□□□□□ -1.49
SSR1P43307 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.75□□□□□ -1.49
SSR1P43307 PFN1P8-201ENST00000497012 543 ntBASIC5.75□□□□□ -1.49
SSR1P43307 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 AL049872.1-201ENST00000556323 322 ntBASIC5.75□□□□□ -1.49
SSR1P43307 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.75□□□□□ -1.49
SSR1P43307 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.75□□□□□ -1.49
SSR1P43307 AC007066.2-202ENST00000566531 914 ntBASIC5.75□□□□□ -1.49
SSR1P43307 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.75□□□□□ -1.49
SSR1P43307 AL365181.4-201ENST00000609800 547 ntBASIC5.75□□□□□ -1.49
SSR1P43307 AC010632.3-201ENST00000611377 369 ntBASIC5.75□□□□□ -1.49
SSR1P43307 uc_338.7-201ENST00000621834 124 ntBASIC5.75□□□□□ -1.49
SSR1P43307 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.75□□□□□ -1.49
SSR1P43307 AC073869.8-201ENST00000641806 335 ntBASIC5.75□□□□□ -1.49
SSR1P43307 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.75□□□□□ -1.49
SSR1P43307 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.75□□□□□ -1.49
SSR1P43307 AL592182.3-201ENST00000642132 3304 ntBASIC5.75□□□□□ -1.49
SSR1P43307 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 AC011447.7-201ENST00000624228 1590 ntBASIC5.75□□□□□ -1.49
SSR1P43307 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.75□□□□□ -1.49
SSR1P43307 AL034549.2-201ENST00000618285 3373 ntBASIC5.75□□□□□ -1.49
SSR1P43307 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSR1P43307 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.75□□□□□ -1.49
SSR1P43307 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
SSR1P43307 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.74□□□□□ -1.49
SSR1P43307 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.74□□□□□ -1.49
SSR1P43307 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms