Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL035079.1-201ENST00000405210 287 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 RN7SKP16-201ENST00000410180 299 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 AL390774.1-201ENST00000411924 246 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 CDY17P-201ENST00000414121 1282 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 VN1R3-201ENST00000418822 919 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC1A1P43005 AC093655.2-201ENST00000425735 631 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 COX6CP13-201ENST00000428703 226 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SLC1A1P43005 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC1A1P43005 RPEP1-201ENST00000504507 658 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC1A1P43005 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC1A1P43005 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.44□□□□□ -1.54
SLC1A1P43005 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC1A1P43005 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC1A1P43005 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC1A1P43005 AC027544.3-201ENST00000535082 757 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC1A1P43005 DPRXP4-201ENST00000578053 568 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC1A1P43005 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC1A1P43005 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.44□□□□□ -1.54
SLC1A1P43005 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC1A1P43005 AC132825.8-201ENST00000640783 297 ntBASIC5.44□□□□□ -1.54
SLC1A1P43005 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SLC1A1P43005 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC1A1P43005 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SLC1A1P43005 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SLC1A1P43005 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC1A1P43005 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC1A1P43005 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC1A1P43005 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC1A1P43005 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC1A1P43005 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC1A1P43005 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC1A1P43005 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC1A1P43005 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC1A1P43005 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC1A1P43005 MIR621-201ENST00000384919 96 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SLC1A1P43005 OOSP1-201ENST00000398992 1270 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 NUDT19P3-201ENST00000404698 555 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 SETP15-201ENST00000412724 337 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC1A1P43005 FAM96AP1-201ENST00000430879 482 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 FTLP19-201ENST00000433300 394 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 AC013410.1-201ENST00000436223 1232 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 CYCSP12-201ENST00000437729 300 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC1A1P43005 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC1A1P43005 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.43□□□□□ -1.54
SLC1A1P43005 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC1A1P43005 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SLC1A1P43005 RPL5P22-201ENST00000480199 884 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC1A1P43005 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC1A1P43005 RNU6-941P-201ENST00000516346 108 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC1A1P43005 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SLC1A1P43005 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC1A1P43005 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC1A1P43005 AC126177.5-201ENST00000549599 178 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC1A1P43005 LSM3P2-201ENST00000551246 273 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.43□□□□□ -1.54
SLC1A1P43005 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC1A1P43005 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC1A1P43005 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC1A1P43005 AC107993.1-201ENST00000591343 684 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 BNIP3P35-201ENST00000604530 490 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 BNIP3P41-202ENST00000616656 861 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 MIR6778-201ENST00000617912 73 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 AC073869.10-201ENST00000642016 354 ntBASIC5.43□□□□□ -1.54
SLC1A1P43005 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC1A1P43005 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC1A1P43005 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC1A1P43005 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC1A1P43005 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC1A1P43005 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC1A1P43005 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC1A1P43005 AC100778.3-201ENST00000580060 1750 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC1A1P43005 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC1A1P43005 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC1A1P43005 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC1A1P43005 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC1A1P43005 RNU1-77P-201ENST00000390868 162 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AL031985.1-201ENST00000392713 418 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 U3.32-201ENST00000408116 212 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC1A1P43005 AC211486.3-201ENST00000412694 621 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 OR6C64P-201ENST00000419708 825 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.42□□□□□ -1.54
SLC1A1P43005 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC1A1P43005 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC1A1P43005 RPL35AP21-201ENST00000437667 333 ntBASIC5.42□□□□□ -1.54
SLC1A1P43005 GTF3AP5-201ENST00000442645 697 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms