Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CASC19-281ENST00000642118 1554 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 RNA5SP305-201ENST00000362665 119 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF9P41273 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF9P41273 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TNFSF9P41273 SNORA48.4-201ENST00000391089 134 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 RPL12P9-201ENST00000412942 488 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF9P41273 RPL12P3-201ENST00000440080 396 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 AC092647.3-201ENST00000443044 633 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 HMGN2P25-201ENST00000486956 268 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF9P41273 AC105420.1-201ENST00000504389 582 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 AC013701.1-201ENST00000522657 465 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF9P41273 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF9P41273 GTF2IP11-201ENST00000526931 420 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF9P41273 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF9P41273 AC022884.2-201ENST00000578535 580 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 MIR4691-201ENST00000583764 85 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF9P41273 AC093799.2-201ENST00000610062 578 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 AC068870.2-201ENST00000620635 389 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF9P41273 AP002799.1-201ENST00000623552 423 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF9P41273 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF9P41273 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
TNFSF9P41273 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.56□□□□□ -1.52
TNFSF9P41273 HSPA8P18-201ENST00000439846 1928 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 AC090220.1-201ENST00000593078 1699 ntBASIC5.56□□□□□ -1.52
TNFSF9P41273 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF9P41273 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF9P41273 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.56□□□□□ -1.52
TNFSF9P41273 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
TNFSF9P41273 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TNFSF9P41273 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF9P41273 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFSF9P41273 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
TNFSF9P41273 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
TNFSF9P41273 HYALP1-201ENST00000417674 1279 ntBASIC5.55□□□□□ -1.52
TNFSF9P41273 RBMY2QP-201ENST00000429799 1147 ntBASIC5.55□□□□□ -1.52
TNFSF9P41273 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF9P41273 KATNBL1P2-201ENST00000433311 835 ntBASIC5.55□□□□□ -1.52
TNFSF9P41273 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.55□□□□□ -1.52
TNFSF9P41273 BX842559.2-201ENST00000451418 605 ntBASIC5.55□□□□□ -1.52
TNFSF9P41273 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF9P41273 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFSF9P41273 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFSF9P41273 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF9P41273 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.55□□□□□ -1.52
TNFSF9P41273 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF9P41273 MTCYBP13-201ENST00000578634 1093 ntBASIC5.55□□□□□ -1.52
TNFSF9P41273 AC133644.2-201ENST00000608142 540 ntBASIC5.55□□□□□ -1.52
TNFSF9P41273 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFSF9P41273 NXF4-202ENST00000416098 1465 ntBASIC5.55□□□□□ -1.52
TNFSF9P41273 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFSF9P41273 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF9P41273 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TNFSF9P41273 THAP12P4-201ENST00000528321 2266 ntBASIC5.55□□□□□ -1.52
TNFSF9P41273 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF9P41273 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF9P41273 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
TNFSF9P41273 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF9P41273 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF9P41273 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TNFSF9P41273 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF9P41273 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF9P41273 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF9P41273 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF9P41273 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF9P41273 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFSF9P41273 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFSF9P41273 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFSF9P41273 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF9P41273 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF9P41273 AL390316.1-201ENST00000406279 553 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TNFSF9P41273 GJA6P-201ENST00000415117 1042 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFSF9P41273 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFSF9P41273 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.54□□□□□ -1.52
TNFSF9P41273 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFSF9P41273 KNOP1P3-201ENST00000446933 426 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 RPS23P1-201ENST00000491662 432 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 RPL37AP8-201ENST00000494116 276 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 AC231760.1-201ENST00000498002 260 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 AC097486.1-201ENST00000515331 210 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFSF9P41273 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFSF9P41273 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.54□□□□□ -1.52
TNFSF9P41273 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF9P41273 MIR4700-201ENST00000578311 74 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 AC105254.2-201ENST00000603636 436 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 AL136295.6-201ENST00000610486 658 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 RNA5SP439-201ENST00000617595 124 ntBASIC5.54□□□□□ -1.52
TNFSF9P41273 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFSF9P41273 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.54□□□□□ -1.52
TNFSF9P41273 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms