Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 RN7SL188P-201ENST00000469842 285 ntBASIC5.17□□□□□ -1.58
RORAP35398 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 OR5M14P-201ENST00000506803 618 ntBASIC5.17□□□□□ -1.58
RORAP35398 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 HMGB1P44-201ENST00000508597 572 ntBASIC5.17□□□□□ -1.58
RORAP35398 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 RNA5SP230-201ENST00000517039 122 ntBASIC5.17□□□□□ -1.58
RORAP35398 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.17□□□□□ -1.58
RORAP35398 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.17□□□□□ -1.58
RORAP35398 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.17□□□□□ -1.58
RORAP35398 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.17□□□□□ -1.58
RORAP35398 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RORAP35398 AC093591.2-201ENST00000565254 3843 ntBASIC5.17□□□□□ -1.58
RORAP35398 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RORAP35398 RBM22P1-201ENST00000578589 1214 ntBASIC5.17□□□□□ -1.58
RORAP35398 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 AC015712.7-201ENST00000615211 635 ntBASIC5.17□□□□□ -1.58
RORAP35398 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.17□□□□□ -1.58
RORAP35398 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.17□□□□□ -1.58
RORAP35398 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.17□□□□□ -1.58
RORAP35398 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RORAP35398 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RORAP35398 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RORAP35398 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RORAP35398 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
RORAP35398 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RORAP35398 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RORAP35398 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.16□□□□□ -1.58
RORAP35398 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RORAP35398 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.16□□□□□ -1.58
RORAP35398 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
RORAP35398 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RORAP35398 AC068870.1-201ENST00000563737 2455 ntBASIC5.16□□□□□ -1.58
RORAP35398 PCAT14-202ENST00000627127 3935 ntBASIC5.16□□□□□ -1.58
RORAP35398 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RORAP35398 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RORAP35398 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RORAP35398 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.16□□□□□ -1.58
RORAP35398 AL133388.1-201ENST00000404509 287 ntBASIC5.16□□□□□ -1.58
RORAP35398 SETP15-201ENST00000412724 337 ntBASIC5.16□□□□□ -1.58
RORAP35398 AC079809.1-201ENST00000415468 276 ntBASIC5.16□□□□□ -1.58
RORAP35398 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.16□□□□□ -1.58
RORAP35398 AC108075.1-201ENST00000424692 529 ntBASIC5.16□□□□□ -1.58
RORAP35398 HSPE1P16-201ENST00000426640 348 ntBASIC5.16□□□□□ -1.58
RORAP35398 RPL12P17-201ENST00000432393 498 ntBASIC5.16□□□□□ -1.58
RORAP35398 LINC02210-201ENST00000444561 288 ntBASIC5.16□□□□□ -1.58
RORAP35398 AL672138.1-201ENST00000450604 1015 ntBASIC5.16□□□□□ -1.58
RORAP35398 AL035090.1-201ENST00000454835 332 ntBASIC5.16□□□□□ -1.58
RORAP35398 RPL32P9-201ENST00000487963 407 ntBASIC5.16□□□□□ -1.58
RORAP35398 AC069304.1-201ENST00000491593 704 ntBASIC5.16□□□□□ -1.58
RORAP35398 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.16□□□□□ -1.58
RORAP35398 MTND6P2-201ENST00000512226 524 ntBASIC5.16□□□□□ -1.58
RORAP35398 RNU6-513P-201ENST00000516104 104 ntBASIC5.16□□□□□ -1.58
RORAP35398 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
RORAP35398 HMGB1P40-201ENST00000525121 540 ntBASIC5.16□□□□□ -1.58
RORAP35398 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.16□□□□□ -1.58
RORAP35398 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.16□□□□□ -1.58
RORAP35398 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.16□□□□□ -1.58
RORAP35398 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.16□□□□□ -1.58
RORAP35398 AC060766.1-201ENST00000590824 627 ntBASIC5.16□□□□□ -1.58
RORAP35398 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.16□□□□□ -1.58
RORAP35398 AC092944.2-201ENST00000605443 889 ntBASIC5.16□□□□□ -1.58
RORAP35398 MIR7155-201ENST00000615925 56 ntBASIC5.16□□□□□ -1.58
RORAP35398 AC109583.2-201ENST00000617367 129 ntBASIC5.16□□□□□ -1.58
RORAP35398 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RORAP35398 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
RORAP35398 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RORAP35398 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RORAP35398 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RORAP35398 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RORAP35398 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
RORAP35398 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RORAP35398 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RORAP35398 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.15□□□□□ -1.58
RORAP35398 AC008079.2-201ENST00000623543 20396 ntBASIC5.15□□□□□ -1.58
RORAP35398 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RORAP35398 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.15□□□□□ -1.58
RORAP35398 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RORAP35398 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RORAP35398 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RORAP35398 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
RORAP35398 RPSAP35-201ENST00000413753 818 ntBASIC5.15□□□□□ -1.59
RORAP35398 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.15□□□□□ -1.59
RORAP35398 AC005033.1-201ENST00000428904 813 ntBASIC5.15□□□□□ -1.59
RORAP35398 RPL7P56-201ENST00000429441 717 ntBASIC5.15□□□□□ -1.59
RORAP35398 FAM96AP1-201ENST00000430879 482 ntBASIC5.15□□□□□ -1.59
RORAP35398 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.15□□□□□ -1.59
RORAP35398 AC099670.2-201ENST00000435130 321 ntBASIC5.15□□□□□ -1.59
RORAP35398 GAPDHP58-201ENST00000438477 1006 ntBASIC5.15□□□□□ -1.59
RORAP35398 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.15□□□□□ -1.59
RORAP35398 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.15□□□□□ -1.59
RORAP35398 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.15□□□□□ -1.59
RORAP35398 AC098583.1-201ENST00000480875 255 ntBASIC5.15□□□□□ -1.59
RORAP35398 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RORAP35398 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms