Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHMT2P34897 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHMT2P34897 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SHMT2P34897 OR55B1P-203ENST00000641518 2602 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 PABPC1P6-201ENST00000445594 1829 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHMT2P34897 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.18□□□□□ -1.58
SHMT2P34897 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHMT2P34897 AL353796.1-201ENST00000561542 3241 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.17□□□□□ -1.58
SHMT2P34897 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SHMT2P34897 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.17□□□□□ -1.58
SHMT2P34897 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHMT2P34897 AC019072.1-201ENST00000604535 1551 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHMT2P34897 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.17□□□□□ -1.58
SHMT2P34897 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.17□□□□□ -1.58
SHMT2P34897 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHMT2P34897 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHMT2P34897 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHMT2P34897 MIR223-201ENST00000385204 110 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SHMT2P34897 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.17□□□□□ -1.58
SHMT2P34897 AL121878.1-201ENST00000418638 859 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.17□□□□□ -1.58
SHMT2P34897 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.17□□□□□ -1.58
SHMT2P34897 FTLP19-201ENST00000433300 394 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.17□□□□□ -1.58
SHMT2P34897 AL163193.1-201ENST00000444895 788 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHMT2P34897 RN7SL172P-201ENST00000460535 303 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 RN7SL177P-201ENST00000476596 299 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 RPL7P6-201ENST00000480903 738 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 RPS4XP1-201ENST00000482189 787 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 UBA52P7-201ENST00000486088 380 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 RPS24P16-201ENST00000497294 392 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.17□□□□□ -1.58
SHMT2P34897 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.17□□□□□ -1.58
SHMT2P34897 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.17□□□□□ -1.58
SHMT2P34897 NMNAT1P5-201ENST00000559657 841 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.17□□□□□ -1.58
SHMT2P34897 AC069307.1-201ENST00000602820 447 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 AC108738.1-201ENST00000603703 237 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 AL161912.3-201ENST00000605404 628 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.17□□□□□ -1.58
SHMT2P34897 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.17□□□□□ -1.58
SHMT2P34897 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.17□□□□□ -1.58
SHMT2P34897 AP003072.5-201ENST00000623872 773 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.17□□□□□ -1.58
SHMT2P34897 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHMT2P34897 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHMT2P34897 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.17□□□□□ -1.58
SHMT2P34897 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHMT2P34897 AL022311.1-201ENST00000623726 19416 ntBASIC5.17□□□□□ -1.58
SHMT2P34897 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHMT2P34897 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHMT2P34897 HSPA8P14-201ENST00000552265 1805 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 AC079298.1-201ENST00000625026 1619 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SHMT2P34897 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHMT2P34897 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHMT2P34897 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SHMT2P34897 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHMT2P34897 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.16□□□□□ -1.58
SHMT2P34897 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHMT2P34897 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHMT2P34897 TET1P1-201ENST00000426627 2301 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHMT2P34897 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SHMT2P34897 RNU1-19P-201ENST00000363306 165 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 OR4K12P-201ENST00000406538 961 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
SHMT2P34897 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.16□□□□□ -1.58
SHMT2P34897 GNG5P5-201ENST00000420444 220 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.16□□□□□ -1.58
SHMT2P34897 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.16□□□□□ -1.58
SHMT2P34897 COX6B1P2-201ENST00000489624 230 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 AC022133.1-201ENST00000490961 571 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 RPS4XP14-201ENST00000493072 781 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 SUMO2P4-201ENST00000504193 276 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.16□□□□□ -1.58
SHMT2P34897 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.16□□□□□ -1.58
SHMT2P34897 RNA5SP34-201ENST00000516887 130 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 AC022360.1-201ENST00000521058 340 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.16□□□□□ -1.58
SHMT2P34897 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.16□□□□□ -1.58
SHMT2P34897 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.16□□□□□ -1.58
SHMT2P34897 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.16□□□□□ -1.58
SHMT2P34897 MIR1269B-201ENST00000580405 75 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SHMT2P34897 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.16□□□□□ -1.58
SHMT2P34897 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.16□□□□□ -1.58
SHMT2P34897 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.16□□□□□ -1.58
SHMT2P34897 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.16□□□□□ -1.58
SHMT2P34897 CYP4F35P-202ENST00000636121 390 ntBASIC5.16□□□□□ -1.58
SHMT2P34897 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SHMT2P34897 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.16□□□□□ -1.58
SHMT2P34897 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.16□□□□□ -1.58
SHMT2P34897 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHMT2P34897 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms